Gene : Glyma.09G245400 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR15615:SF28 - CYCLIN-U4-1 Genomic Order:  2454
Name:  ? Glyma.09G245400 Secondary Identifier:  ? PAC:30486044
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G245400 0.5kb upstream 0.5kb upstream 2466 true Chr09: 46747208-46749673 Glycine max
Glyma.09G245400 0.5kb upstream 0.5kb upstream 500 false Chr09: 46747208-46747707 Glycine max
Glyma.09G245400 0.5kb downstream 0.5kb downstream 2466 true Chr09: 46747708-46750173 Glycine max
Glyma.09G245400 0.5kb downstream 0.5kb downstream 500 false Chr09: 46749674-46750173 Glycine max
Glyma.09G245400 1.0kb upstream 1.0kb upstream 2966 true Chr09: 46746708-46749673 Glycine max
Glyma.09G245400 1.0kb upstream 1.0kb upstream 1000 false Chr09: 46746708-46747707 Glycine max
Glyma.09G245400 1.0kb downstream 1.0kb downstream 2966 true Chr09: 46747708-46750673 Glycine max
Glyma.09G245400 1.0kb downstream 1.0kb downstream 1000 false Chr09: 46749674-46750673 Glycine max
Glyma.09G245400 2.0kb upstream 2.0kb upstream 3966 true Chr09: 46745708-46749673 Glycine max
Glyma.09G245400 2.0kb upstream 2.0kb upstream 2000 false Chr09: 46745708-46747707 Glycine max
Glyma.09G245400 2.0kb downstream 2.0kb downstream 3966 true Chr09: 46747708-46751673 Glycine max
Glyma.09G245400 2.0kb downstream 2.0kb downstream 2000 false Chr09: 46749674-46751673 Glycine max
Glyma.09G245400 5.0kb upstream 5.0kb upstream 6966 true Chr09: 46742708-46749673 Glycine max
Glyma.09G245400 5.0kb upstream 5.0kb upstream 5000 false Chr09: 46742708-46747707 Glycine max
Glyma.09G245400 5.0kb downstream 5.0kb downstream 6966 true Chr09: 46747708-46754673 Glycine max
Glyma.09G245400 5.0kb downstream 5.0kb downstream 5000 false Chr09: 46749674-46754673 Glycine max
Glyma.09G245400 10.0kb upstream 10.0kb upstream 11966 true Chr09: 46737708-46749673 Glycine max
Glyma.09G245400 10.0kb upstream 10.0kb upstream 10000 false Chr09: 46737708-46747707 Glycine max
Glyma.09G245400 10.0kb downstream 10.0kb downstream 11966 true Chr09: 46747708-46759673 Glycine max
Glyma.09G245400 10.0kb downstream 10.0kb downstream 10000 false Chr09: 46749674-46759673 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124042717 5270 Rosid View MSA
122242870 5265 Fabidae Singleton cluster - no MSA
123743073 5271 Pentapetalae View MSA
122792546 5272 Eudicot View MSA
122043012 5273 Angiosperm View MSA
121349638 5274 Embryophyte View MSA
123428486 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.11638 0.0 4.13469   Low
cufflinks 6.20235 0.0 19.4778    
cufflinks 2.62302 0.0 9.14296    
cufflinks 14.679 0.0 41.2276    
cufflinks 20.057 0.0 54.9648 High High
cufflinks 13.7777 0.0 39.0108    
cufflinks 2.58884 0.0 9.07234    
cufflinks 6.32774 0.0 19.811    
cufflinks 8.05223 0.0 24.3864    
cufflinks 4.894        
cufflinks 0.281        
cufflinks 2.456        
cufflinks 10.883     High High
cufflinks 15.734     High High
cufflinks 0.01     Low Low
cufflinks 1.237        
cufflinks 0.618        
cufflinks 12.681     High High
cufflinks 2.01        
cufflinks 0.51        
cufflinks 0.255        
cufflinks 0.591        
cufflinks 1.096        
cufflinks 0.066       Low
cufflinks 0.486        
cufflinks 1.43        

0 Strain