Gene : Glyma.09G245800 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR31100:SF14 - AT-HOOK MOTIF NUCLEAR LOCALIZED PROTEIN 21-RELATED Genomic Order:  2458
Name:  ? Glyma.09G245800 Secondary Identifier:  ? PAC:30484884
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G245800 0.5kb upstream 0.5kb upstream 3004 true Chr09: 46778698-46781701 Glycine max
Glyma.09G245800 0.5kb upstream 0.5kb upstream 500 false Chr09: 46778698-46779197 Glycine max
Glyma.09G245800 0.5kb downstream 0.5kb downstream 3004 true Chr09: 46779198-46782201 Glycine max
Glyma.09G245800 0.5kb downstream 0.5kb downstream 500 false Chr09: 46781702-46782201 Glycine max
Glyma.09G245800 1.0kb upstream 1.0kb upstream 3504 true Chr09: 46778198-46781701 Glycine max
Glyma.09G245800 1.0kb upstream 1.0kb upstream 1000 false Chr09: 46778198-46779197 Glycine max
Glyma.09G245800 1.0kb downstream 1.0kb downstream 3504 true Chr09: 46779198-46782701 Glycine max
Glyma.09G245800 1.0kb downstream 1.0kb downstream 1000 false Chr09: 46781702-46782701 Glycine max
Glyma.09G245800 2.0kb upstream 2.0kb upstream 4504 true Chr09: 46777198-46781701 Glycine max
Glyma.09G245800 2.0kb upstream 2.0kb upstream 2000 false Chr09: 46777198-46779197 Glycine max
Glyma.09G245800 2.0kb downstream 2.0kb downstream 4504 true Chr09: 46779198-46783701 Glycine max
Glyma.09G245800 2.0kb downstream 2.0kb downstream 2000 false Chr09: 46781702-46783701 Glycine max
Glyma.09G245800 5.0kb upstream 5.0kb upstream 7504 true Chr09: 46774198-46781701 Glycine max
Glyma.09G245800 5.0kb upstream 5.0kb upstream 5000 false Chr09: 46774198-46779197 Glycine max
Glyma.09G245800 5.0kb downstream 5.0kb downstream 7504 true Chr09: 46779198-46786701 Glycine max
Glyma.09G245800 5.0kb downstream 5.0kb downstream 5000 false Chr09: 46781702-46786701 Glycine max
Glyma.09G245800 10.0kb upstream 10.0kb upstream 12504 true Chr09: 46769198-46781701 Glycine max
Glyma.09G245800 10.0kb upstream 10.0kb upstream 10000 false Chr09: 46769198-46779197 Glycine max
Glyma.09G245800 10.0kb downstream 10.0kb downstream 12504 true Chr09: 46779198-46791701 Glycine max
Glyma.09G245800 10.0kb downstream 10.0kb downstream 10000 false Chr09: 46781702-46791701 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300098 5265 Fabidae View MSA
124065416 5270 Rosid View MSA
123737026 5271 Pentapetalae View MSA
122789086 5272 Eudicot View MSA
122049731 5273 Angiosperm View MSA
121348557 5274 Embryophyte View MSA
123380913 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.115124 0.0 0.466497 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 13.4826 0.0 48.8099    
cufflinks 27.1208 0.0 106.308 High  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 29.7299 0.0 101.254 High  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.164        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 2.499        
cufflinks 1.294        
cufflinks 1.528        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 3.348        
cufflinks 0.003     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.146        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 2.658        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 2.469        

0 Strain