Gene : Glyma.09G247400 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10288//PTHR10288:SF159 - KH DOMAIN CONTAINING RNA BINDING PROTEIN Genomic Order:  2474
Name:  ? Glyma.09G247400 Secondary Identifier:  ? PAC:30485314
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G247400 0.5kb upstream 0.5kb upstream 6111 true Chr09: 46885769-46891879 Glycine max
Glyma.09G247400 0.5kb upstream 0.5kb upstream 500 false Chr09: 46891380-46891879 Glycine max
Glyma.09G247400 0.5kb downstream 0.5kb downstream 6111 true Chr09: 46885269-46891379 Glycine max
Glyma.09G247400 0.5kb downstream 0.5kb downstream 500 false Chr09: 46885269-46885768 Glycine max
Glyma.09G247400 1.0kb upstream 1.0kb upstream 6611 true Chr09: 46885769-46892379 Glycine max
Glyma.09G247400 1.0kb upstream 1.0kb upstream 1000 false Chr09: 46891380-46892379 Glycine max
Glyma.09G247400 1.0kb downstream 1.0kb downstream 6611 true Chr09: 46884769-46891379 Glycine max
Glyma.09G247400 1.0kb downstream 1.0kb downstream 1000 false Chr09: 46884769-46885768 Glycine max
Glyma.09G247400 2.0kb upstream 2.0kb upstream 7611 true Chr09: 46885769-46893379 Glycine max
Glyma.09G247400 2.0kb upstream 2.0kb upstream 2000 false Chr09: 46891380-46893379 Glycine max
Glyma.09G247400 2.0kb downstream 2.0kb downstream 7611 true Chr09: 46883769-46891379 Glycine max
Glyma.09G247400 2.0kb downstream 2.0kb downstream 2000 false Chr09: 46883769-46885768 Glycine max
Glyma.09G247400 5.0kb upstream 5.0kb upstream 10611 true Chr09: 46885769-46896379 Glycine max
Glyma.09G247400 5.0kb upstream 5.0kb upstream 5000 false Chr09: 46891380-46896379 Glycine max
Glyma.09G247400 5.0kb downstream 5.0kb downstream 10611 true Chr09: 46880769-46891379 Glycine max
Glyma.09G247400 5.0kb downstream 5.0kb downstream 5000 false Chr09: 46880769-46885768 Glycine max
Glyma.09G247400 10.0kb upstream 10.0kb upstream 15611 true Chr09: 46885769-46901379 Glycine max
Glyma.09G247400 10.0kb upstream 10.0kb upstream 10000 false Chr09: 46891380-46901379 Glycine max
Glyma.09G247400 10.0kb downstream 10.0kb downstream 15611 true Chr09: 46875769-46891379 Glycine max
Glyma.09G247400 10.0kb downstream 10.0kb downstream 10000 false Chr09: 46875769-46885768 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303366 5265 Fabidae View MSA
124071830 5270 Rosid View MSA
123744817 5271 Pentapetalae View MSA
122797103 5272 Eudicot View MSA
122049280 5273 Angiosperm View MSA
121348372 5274 Embryophyte View MSA
123428845 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.43692 0.0 35.7353    
cufflinks 5.43338 0.0 26.2321    
cufflinks 6.02785 0.0 28.1759    
cufflinks 7.46667 0.0 32.2728    
cufflinks 6.33841 0.0 28.7303    
cufflinks 3.50856 0.0 19.1227   Low
cufflinks 11.5141 0.0 47.1336   High
cufflinks 9.62178 0.0 39.5199    
cufflinks 6.88603 0.0 30.6351    
cufflinks 0.319       Low
cufflinks 0.417        
cufflinks 0.369        
cufflinks 0.3       Low
cufflinks 0.371        
cufflinks 0.456        
cufflinks 0.431        
cufflinks 0.516       High
cufflinks 0.378        
cufflinks 0.428        
cufflinks 0.294       Low
cufflinks 0.422        
cufflinks 0.364        
cufflinks 0.354        
cufflinks 0.445        
cufflinks 0.34        
cufflinks 0.521       High

0 Strain