Gene : Glyma.09G233900 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR22835//PTHR22835:SF168 - ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN Genomic Order:  2339
Name:  ? Glyma.09G233900 Secondary Identifier:  ? PAC:30485273
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax LIPAS-PWY Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G233900 0.5kb upstream 0.5kb upstream 2536 true Chr09: 45643600-45646135 Glycine max
Glyma.09G233900 0.5kb upstream 0.5kb upstream 500 false Chr09: 45643600-45644099 Glycine max
Glyma.09G233900 0.5kb downstream 0.5kb downstream 2536 true Chr09: 45644100-45646635 Glycine max
Glyma.09G233900 0.5kb downstream 0.5kb downstream 500 false Chr09: 45646136-45646635 Glycine max
Glyma.09G233900 1.0kb upstream 1.0kb upstream 3036 true Chr09: 45643100-45646135 Glycine max
Glyma.09G233900 1.0kb upstream 1.0kb upstream 1000 false Chr09: 45643100-45644099 Glycine max
Glyma.09G233900 1.0kb downstream 1.0kb downstream 3036 true Chr09: 45644100-45647135 Glycine max
Glyma.09G233900 1.0kb downstream 1.0kb downstream 1000 false Chr09: 45646136-45647135 Glycine max
Glyma.09G233900 2.0kb upstream 2.0kb upstream 4036 true Chr09: 45642100-45646135 Glycine max
Glyma.09G233900 2.0kb upstream 2.0kb upstream 2000 false Chr09: 45642100-45644099 Glycine max
Glyma.09G233900 2.0kb downstream 2.0kb downstream 4036 true Chr09: 45644100-45648135 Glycine max
Glyma.09G233900 2.0kb downstream 2.0kb downstream 2000 false Chr09: 45646136-45648135 Glycine max
Glyma.09G233900 5.0kb upstream 5.0kb upstream 7036 true Chr09: 45639100-45646135 Glycine max
Glyma.09G233900 5.0kb upstream 5.0kb upstream 5000 false Chr09: 45639100-45644099 Glycine max
Glyma.09G233900 5.0kb downstream 5.0kb downstream 7036 true Chr09: 45644100-45651135 Glycine max
Glyma.09G233900 5.0kb downstream 5.0kb downstream 5000 false Chr09: 45646136-45651135 Glycine max
Glyma.09G233900 10.0kb upstream 10.0kb upstream 12036 true Chr09: 45634100-45646135 Glycine max
Glyma.09G233900 10.0kb upstream 10.0kb upstream 10000 false Chr09: 45634100-45644099 Glycine max
Glyma.09G233900 10.0kb downstream 10.0kb downstream 12036 true Chr09: 45644100-45656135 Glycine max
Glyma.09G233900 10.0kb downstream 10.0kb downstream 10000 false Chr09: 45646136-45656135 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299793 5265 Fabidae View MSA
124069396 5270 Rosid View MSA
123753785 5271 Pentapetalae View MSA
122797352 5272 Eudicot View MSA
122051674 5273 Angiosperm View MSA
121351762 5274 Embryophyte View MSA
123428079 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0559224 0.0 0.227817 Low Low
cufflinks 0.810698 0.0 2.93503    
cufflinks 0.521724 0.0 1.9332    
cufflinks 77.5784 0.0 228.462 High High
cufflinks 0.165609 0.0 0.646689 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 144.539 0.0 474.059 High High
cufflinks 0.462438 0.0 1.72505    
cufflinks 1.17547 0.0 4.14284    
cufflinks 0.394        
cufflinks 0.028     Low Low
cufflinks 0.155        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.012     Low Low
cufflinks 0.019     Low Low
cufflinks 2.685       High
cufflinks 0.109        
cufflinks 0.461        
cufflinks 0.71        
cufflinks 0.314        
cufflinks 0.031     Low Low
cufflinks 0.472        
cufflinks 0.681        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.798        
cufflinks 0.029     Low Low

0 Strain