Gene : Glyma.09G236200 G. max Wm82.a2.v1
Defline:  (1 of 79) PF01357 - Pollen allergen (Pollen_allerg_1) Genomic Order:  2362
Name:  ? Glyma.09G236200 Secondary Identifier:  ? PAC:30485533
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G236200 0.5kb upstream 0.5kb upstream 2862 true Chr09: 45872922-45875783 Glycine max
Glyma.09G236200 0.5kb upstream 0.5kb upstream 500 false Chr09: 45872922-45873421 Glycine max
Glyma.09G236200 0.5kb downstream 0.5kb downstream 2862 true Chr09: 45873422-45876283 Glycine max
Glyma.09G236200 0.5kb downstream 0.5kb downstream 500 false Chr09: 45875784-45876283 Glycine max
Glyma.09G236200 1.0kb upstream 1.0kb upstream 3362 true Chr09: 45872422-45875783 Glycine max
Glyma.09G236200 1.0kb upstream 1.0kb upstream 1000 false Chr09: 45872422-45873421 Glycine max
Glyma.09G236200 1.0kb downstream 1.0kb downstream 3362 true Chr09: 45873422-45876783 Glycine max
Glyma.09G236200 1.0kb downstream 1.0kb downstream 1000 false Chr09: 45875784-45876783 Glycine max
Glyma.09G236200 2.0kb upstream 2.0kb upstream 4362 true Chr09: 45871422-45875783 Glycine max
Glyma.09G236200 2.0kb upstream 2.0kb upstream 2000 false Chr09: 45871422-45873421 Glycine max
Glyma.09G236200 2.0kb downstream 2.0kb downstream 4362 true Chr09: 45873422-45877783 Glycine max
Glyma.09G236200 2.0kb downstream 2.0kb downstream 2000 false Chr09: 45875784-45877783 Glycine max
Glyma.09G236200 5.0kb upstream 5.0kb upstream 7362 true Chr09: 45868422-45875783 Glycine max
Glyma.09G236200 5.0kb upstream 5.0kb upstream 5000 false Chr09: 45868422-45873421 Glycine max
Glyma.09G236200 5.0kb downstream 5.0kb downstream 7362 true Chr09: 45873422-45880783 Glycine max
Glyma.09G236200 5.0kb downstream 5.0kb downstream 5000 false Chr09: 45875784-45880783 Glycine max
Glyma.09G236200 10.0kb upstream 10.0kb upstream 12362 true Chr09: 45863422-45875783 Glycine max
Glyma.09G236200 10.0kb upstream 10.0kb upstream 10000 false Chr09: 45863422-45873421 Glycine max
Glyma.09G236200 10.0kb downstream 10.0kb downstream 12362 true Chr09: 45873422-45885783 Glycine max
Glyma.09G236200 10.0kb downstream 10.0kb downstream 10000 false Chr09: 45875784-45885783 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310156 5265 Fabidae View MSA
124070528 5270 Rosid View MSA
123753539 5271 Pentapetalae View MSA
122795213 5272 Eudicot View MSA
122043079 5273 Angiosperm View MSA
123429074 5275 Viridiplantae View MSA
121351680 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.7328 0.0 35.568    
cufflinks 29.9366 0.0 90.9585 High  
cufflinks 16.9891 0.0 59.0387    
cufflinks 179.812 0.0 855.669 High High
cufflinks 3.47262 0.0 11.6968    
cufflinks 4.17864 0.0 17.1103    
cufflinks 8.82846 0.0 29.3139    
cufflinks 102.876 0.0 398.225 High High
cufflinks 1.84151 0.0 7.28087   Low
cufflinks 56.529     High High
cufflinks 0.079       Low
cufflinks 9.091     High  
cufflinks 0.41        
cufflinks 1.329        
cufflinks 0.095       Low
cufflinks 9.345     High  
cufflinks 1.821        
cufflinks 17.46     High  
cufflinks 19.559     High  
cufflinks 8.772     High  
cufflinks 0.577        
cufflinks 10.782     High  
cufflinks 16.322     High  
cufflinks 0.053     Low Low
cufflinks 6.762        
cufflinks 0.406        

0 Strain