Gene : Glyma.09G238000 G. max Wm82.a2.v1
Defline:  (1 of 9) PTHR22950:SF280 - TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN Genomic Order:  2380
Name:  ? Glyma.09G238000 Secondary Identifier:  ? PAC:30484501
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G238000 0.5kb upstream 0.5kb upstream 2677 true Chr09: 45965499-45968175 Glycine max
Glyma.09G238000 0.5kb upstream 0.5kb upstream 500 false Chr09: 45967676-45968175 Glycine max
Glyma.09G238000 0.5kb downstream 0.5kb downstream 2677 true Chr09: 45964999-45967675 Glycine max
Glyma.09G238000 0.5kb downstream 0.5kb downstream 500 false Chr09: 45964999-45965498 Glycine max
Glyma.09G238000 1.0kb upstream 1.0kb upstream 3177 true Chr09: 45965499-45968675 Glycine max
Glyma.09G238000 1.0kb upstream 1.0kb upstream 1000 false Chr09: 45967676-45968675 Glycine max
Glyma.09G238000 1.0kb downstream 1.0kb downstream 3177 true Chr09: 45964499-45967675 Glycine max
Glyma.09G238000 1.0kb downstream 1.0kb downstream 1000 false Chr09: 45964499-45965498 Glycine max
Glyma.09G238000 2.0kb upstream 2.0kb upstream 4177 true Chr09: 45965499-45969675 Glycine max
Glyma.09G238000 2.0kb upstream 2.0kb upstream 2000 false Chr09: 45967676-45969675 Glycine max
Glyma.09G238000 2.0kb downstream 2.0kb downstream 4177 true Chr09: 45963499-45967675 Glycine max
Glyma.09G238000 2.0kb downstream 2.0kb downstream 2000 false Chr09: 45963499-45965498 Glycine max
Glyma.09G238000 5.0kb upstream 5.0kb upstream 7177 true Chr09: 45965499-45972675 Glycine max
Glyma.09G238000 5.0kb upstream 5.0kb upstream 5000 false Chr09: 45967676-45972675 Glycine max
Glyma.09G238000 5.0kb downstream 5.0kb downstream 7177 true Chr09: 45960499-45967675 Glycine max
Glyma.09G238000 5.0kb downstream 5.0kb downstream 5000 false Chr09: 45960499-45965498 Glycine max
Glyma.09G238000 10.0kb upstream 10.0kb upstream 12177 true Chr09: 45965499-45977675 Glycine max
Glyma.09G238000 10.0kb upstream 10.0kb upstream 10000 false Chr09: 45967676-45977675 Glycine max
Glyma.09G238000 10.0kb downstream 10.0kb downstream 12177 true Chr09: 45955499-45967675 Glycine max
Glyma.09G238000 10.0kb downstream 10.0kb downstream 10000 false Chr09: 45955499-45965498 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041365 5273 Angiosperm View MSA
122311679 5265 Fabidae View MSA
124072696 5270 Rosid View MSA
123745123 5271 Pentapetalae View MSA
122792939 5272 Eudicot View MSA
123429000 5275 Viridiplantae View MSA
121349038 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.34495 0.0 4.74422    
cufflinks 1.01523 0.0 3.64905    
cufflinks 1.65019 0.0 5.68029    
cufflinks 0.638217 0.0 2.35823    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.116698 0.0 0.463468 Low  
cufflinks 0.594825 0.0 2.2096    
cufflinks 2.02901 0.0 6.86989    
cufflinks 0.0155703 0.0 0.0704245 Low Low
cufflinks 0.342        
cufflinks 0.009     Low Low
cufflinks 1.366        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.146        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.096        
cufflinks 1.021        
cufflinks 0.266        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.329        
cufflinks 0.93        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.444        
cufflinks 0.007     Low Low

0 Strain