Gene : Glyma.09G238100 G. max Wm82.a2.v1
Defline:  (1 of 9) PTHR22950:SF280 - TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN Genomic Order:  2381
Name:  ? Glyma.09G238100 Secondary Identifier:  ? PAC:30483826
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G238100 0.5kb upstream 0.5kb upstream 2978 true Chr09: 45974638-45977615 Glycine max
Glyma.09G238100 0.5kb upstream 0.5kb upstream 500 false Chr09: 45977116-45977615 Glycine max
Glyma.09G238100 0.5kb downstream 0.5kb downstream 2978 true Chr09: 45974138-45977115 Glycine max
Glyma.09G238100 0.5kb downstream 0.5kb downstream 500 false Chr09: 45974138-45974637 Glycine max
Glyma.09G238100 1.0kb upstream 1.0kb upstream 3478 true Chr09: 45974638-45978115 Glycine max
Glyma.09G238100 1.0kb upstream 1.0kb upstream 1000 false Chr09: 45977116-45978115 Glycine max
Glyma.09G238100 1.0kb downstream 1.0kb downstream 3478 true Chr09: 45973638-45977115 Glycine max
Glyma.09G238100 1.0kb downstream 1.0kb downstream 1000 false Chr09: 45973638-45974637 Glycine max
Glyma.09G238100 2.0kb upstream 2.0kb upstream 4478 true Chr09: 45974638-45979115 Glycine max
Glyma.09G238100 2.0kb upstream 2.0kb upstream 2000 false Chr09: 45977116-45979115 Glycine max
Glyma.09G238100 2.0kb downstream 2.0kb downstream 4478 true Chr09: 45972638-45977115 Glycine max
Glyma.09G238100 2.0kb downstream 2.0kb downstream 2000 false Chr09: 45972638-45974637 Glycine max
Glyma.09G238100 5.0kb upstream 5.0kb upstream 7478 true Chr09: 45974638-45982115 Glycine max
Glyma.09G238100 5.0kb upstream 5.0kb upstream 5000 false Chr09: 45977116-45982115 Glycine max
Glyma.09G238100 5.0kb downstream 5.0kb downstream 7478 true Chr09: 45969638-45977115 Glycine max
Glyma.09G238100 5.0kb downstream 5.0kb downstream 5000 false Chr09: 45969638-45974637 Glycine max
Glyma.09G238100 10.0kb upstream 10.0kb upstream 12478 true Chr09: 45974638-45987115 Glycine max
Glyma.09G238100 10.0kb upstream 10.0kb upstream 10000 false Chr09: 45977116-45987115 Glycine max
Glyma.09G238100 10.0kb downstream 10.0kb downstream 12478 true Chr09: 45964638-45977115 Glycine max
Glyma.09G238100 10.0kb downstream 10.0kb downstream 10000 false Chr09: 45964638-45974637 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041365 5273 Angiosperm View MSA
122311679 5265 Fabidae View MSA
124072696 5270 Rosid View MSA
123745123 5271 Pentapetalae View MSA
122792939 5272 Eudicot View MSA
123429000 5275 Viridiplantae View MSA
121349038 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.74283 0.0 11.436    
cufflinks 3.24763 0.0 10.0905    
cufflinks 4.42326 0.0 13.0881   High
cufflinks 1.014 0.0 3.60197   Low
cufflinks 2.03606 0.0 6.77607    
cufflinks 3.45307 0.0 10.6475    
cufflinks 1.45401 0.0 5.02756   Low
cufflinks 2.03916 0.0 6.76136    
cufflinks 3.04912 0.0 9.56036    
cufflinks 28.413     High High
cufflinks 25.332     High  
cufflinks 6.385        
cufflinks 2.892        
cufflinks 1.431       Low
cufflinks 44.161     High High
cufflinks 1.922       Low
cufflinks 4.32        
cufflinks 3.714        
cufflinks 7.507     High  
cufflinks 2.901        
cufflinks 23.649     High  
cufflinks 2.324       Low
cufflinks 31.923     High High
cufflinks 33.015     High High
cufflinks 2.581        
cufflinks 16.326     High  

0 Strain