Gene : Glyma.09G238200 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR19139//PTHR19139:SF142 - AQUAPORIN TRANSPORTER Genomic Order:  2382
Name:  ? Glyma.09G238200 Secondary Identifier:  ? PAC:30483710
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G238200 0.5kb upstream 0.5kb upstream 5445 true Chr09: 46028692-46034136 Glycine max
Glyma.09G238200 0.5kb upstream 0.5kb upstream 500 false Chr09: 46028692-46029191 Glycine max
Glyma.09G238200 0.5kb downstream 0.5kb downstream 5445 true Chr09: 46029192-46034636 Glycine max
Glyma.09G238200 0.5kb downstream 0.5kb downstream 500 false Chr09: 46034137-46034636 Glycine max
Glyma.09G238200 1.0kb upstream 1.0kb upstream 5945 true Chr09: 46028192-46034136 Glycine max
Glyma.09G238200 1.0kb upstream 1.0kb upstream 1000 false Chr09: 46028192-46029191 Glycine max
Glyma.09G238200 1.0kb downstream 1.0kb downstream 5945 true Chr09: 46029192-46035136 Glycine max
Glyma.09G238200 1.0kb downstream 1.0kb downstream 1000 false Chr09: 46034137-46035136 Glycine max
Glyma.09G238200 2.0kb upstream 2.0kb upstream 6945 true Chr09: 46027192-46034136 Glycine max
Glyma.09G238200 2.0kb upstream 2.0kb upstream 2000 false Chr09: 46027192-46029191 Glycine max
Glyma.09G238200 2.0kb downstream 2.0kb downstream 6945 true Chr09: 46029192-46036136 Glycine max
Glyma.09G238200 2.0kb downstream 2.0kb downstream 2000 false Chr09: 46034137-46036136 Glycine max
Glyma.09G238200 5.0kb upstream 5.0kb upstream 9945 true Chr09: 46024192-46034136 Glycine max
Glyma.09G238200 5.0kb upstream 5.0kb upstream 5000 false Chr09: 46024192-46029191 Glycine max
Glyma.09G238200 5.0kb downstream 5.0kb downstream 9945 true Chr09: 46029192-46039136 Glycine max
Glyma.09G238200 5.0kb downstream 5.0kb downstream 5000 false Chr09: 46034137-46039136 Glycine max
Glyma.09G238200 10.0kb upstream 10.0kb upstream 14945 true Chr09: 46019192-46034136 Glycine max
Glyma.09G238200 10.0kb upstream 10.0kb upstream 10000 false Chr09: 46019192-46029191 Glycine max
Glyma.09G238200 10.0kb downstream 10.0kb downstream 14945 true Chr09: 46029192-46044136 Glycine max
Glyma.09G238200 10.0kb downstream 10.0kb downstream 10000 false Chr09: 46034137-46044136 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306747 5265 Fabidae View MSA
124070842 5270 Rosid View MSA
123748349 5271 Pentapetalae View MSA
122794244 5272 Eudicot View MSA
122048771 5273 Angiosperm View MSA
121349244 5274 Embryophyte View MSA
123427856 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.95365 0.0 15.1434    
cufflinks 85.8942 0.0 246.765 High High
cufflinks 8.31462 0.0 23.6929    
cufflinks 13.7844 0.0 37.5815    
cufflinks 17.1629 0.0 46.2194    
cufflinks 12.1998 0.0 33.5476    
cufflinks 1.03772 0.0 3.75897   Low
cufflinks 4.50432 0.0 13.9365    
cufflinks 24.4951 0.0 65.3706 High  
cufflinks 2.131        
cufflinks 0.45       Low
cufflinks 4.799        
cufflinks 2.488        
cufflinks 0.084       Low
cufflinks 0.919        
cufflinks 6.419        
cufflinks 1.931        
cufflinks 4.074        
cufflinks 41.02     High High
cufflinks 4.283        
cufflinks 1.078        
cufflinks 6.316        
cufflinks 10.64     High High
cufflinks 3.278        
cufflinks 5.454        
cufflinks 0.908        

0 Strain