Gene : Glyma.09G239600 G. max Wm82.a2.v1
Defline:  (1 of 12) PF06974 - Protein of unknown function (DUF1298) (DUF1298) Genomic Order:  2396
Name:  ? Glyma.09G239600 Secondary Identifier:  ? PAC:30483115
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G239600 0.5kb upstream 0.5kb upstream 3689 true Chr09: 46209375-46213063 Glycine max
Glyma.09G239600 0.5kb upstream 0.5kb upstream 500 false Chr09: 46209375-46209874 Glycine max
Glyma.09G239600 0.5kb downstream 0.5kb downstream 3689 true Chr09: 46209875-46213563 Glycine max
Glyma.09G239600 0.5kb downstream 0.5kb downstream 500 false Chr09: 46213064-46213563 Glycine max
Glyma.09G239600 1.0kb upstream 1.0kb upstream 4189 true Chr09: 46208875-46213063 Glycine max
Glyma.09G239600 1.0kb upstream 1.0kb upstream 1000 false Chr09: 46208875-46209874 Glycine max
Glyma.09G239600 1.0kb downstream 1.0kb downstream 4189 true Chr09: 46209875-46214063 Glycine max
Glyma.09G239600 1.0kb downstream 1.0kb downstream 1000 false Chr09: 46213064-46214063 Glycine max
Glyma.09G239600 2.0kb upstream 2.0kb upstream 5189 true Chr09: 46207875-46213063 Glycine max
Glyma.09G239600 2.0kb upstream 2.0kb upstream 2000 false Chr09: 46207875-46209874 Glycine max
Glyma.09G239600 2.0kb downstream 2.0kb downstream 5189 true Chr09: 46209875-46215063 Glycine max
Glyma.09G239600 2.0kb downstream 2.0kb downstream 2000 false Chr09: 46213064-46215063 Glycine max
Glyma.09G239600 5.0kb upstream 5.0kb upstream 8189 true Chr09: 46204875-46213063 Glycine max
Glyma.09G239600 5.0kb upstream 5.0kb upstream 5000 false Chr09: 46204875-46209874 Glycine max
Glyma.09G239600 5.0kb downstream 5.0kb downstream 8189 true Chr09: 46209875-46218063 Glycine max
Glyma.09G239600 5.0kb downstream 5.0kb downstream 5000 false Chr09: 46213064-46218063 Glycine max
Glyma.09G239600 10.0kb upstream 10.0kb upstream 13189 true Chr09: 46199875-46213063 Glycine max
Glyma.09G239600 10.0kb upstream 10.0kb upstream 10000 false Chr09: 46199875-46209874 Glycine max
Glyma.09G239600 10.0kb downstream 10.0kb downstream 13189 true Chr09: 46209875-46223063 Glycine max
Glyma.09G239600 10.0kb downstream 10.0kb downstream 10000 false Chr09: 46213064-46223063 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313899 5265 Fabidae View MSA
124072323 5270 Rosid View MSA
123749190 5271 Pentapetalae View MSA
122797420 5272 Eudicot View MSA
122048260 5273 Angiosperm View MSA
123428993 5275 Viridiplantae View MSA
121310908 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.8087 0.0 41.5804    
cufflinks 11.9016 0.0 36.1858    
cufflinks 13.0074 0.0 45.0903    
cufflinks 140.529 0.0 689.78 High High
cufflinks 2.30945 0.0 8.06689    
cufflinks 25.6576 0.0 89.565 High  
cufflinks 1.07994 0.0 4.69889   Low
cufflinks 11.8981 0.0 42.2898    
cufflinks 1.17232 0.0 4.98772   Low
cufflinks 21.735     High High
cufflinks 2.286        
cufflinks 6.938        
cufflinks 0.79        
cufflinks 0.272       Low
cufflinks 0.391       Low
cufflinks 2.398        
cufflinks 0.512       Low
cufflinks 8.21     High  
cufflinks 9.382     High High
cufflinks 3.204        
cufflinks 2.625        
cufflinks 3.085        
cufflinks 19.176     High High
cufflinks 1.663        
cufflinks 1.887        
cufflinks 0.939        

0 Strain