Gene : Glyma.09G240300 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11028 - VACUOLAR ATP SYNTHASE SUBUNIT AC39 Genomic Order:  2403
Name:  ? Glyma.09G240300 Secondary Identifier:  ? PAC:30485051
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G240300 0.5kb upstream 0.5kb upstream 5050 true Chr09: 46273381-46278430 Glycine max
Glyma.09G240300 0.5kb upstream 0.5kb upstream 500 false Chr09: 46273381-46273880 Glycine max
Glyma.09G240300 0.5kb downstream 0.5kb downstream 5050 true Chr09: 46273881-46278930 Glycine max
Glyma.09G240300 0.5kb downstream 0.5kb downstream 500 false Chr09: 46278431-46278930 Glycine max
Glyma.09G240300 1.0kb upstream 1.0kb upstream 5550 true Chr09: 46272881-46278430 Glycine max
Glyma.09G240300 1.0kb upstream 1.0kb upstream 1000 false Chr09: 46272881-46273880 Glycine max
Glyma.09G240300 1.0kb downstream 1.0kb downstream 5550 true Chr09: 46273881-46279430 Glycine max
Glyma.09G240300 1.0kb downstream 1.0kb downstream 1000 false Chr09: 46278431-46279430 Glycine max
Glyma.09G240300 2.0kb upstream 2.0kb upstream 6550 true Chr09: 46271881-46278430 Glycine max
Glyma.09G240300 2.0kb upstream 2.0kb upstream 2000 false Chr09: 46271881-46273880 Glycine max
Glyma.09G240300 2.0kb downstream 2.0kb downstream 6550 true Chr09: 46273881-46280430 Glycine max
Glyma.09G240300 2.0kb downstream 2.0kb downstream 2000 false Chr09: 46278431-46280430 Glycine max
Glyma.09G240300 5.0kb upstream 5.0kb upstream 9550 true Chr09: 46268881-46278430 Glycine max
Glyma.09G240300 5.0kb upstream 5.0kb upstream 5000 false Chr09: 46268881-46273880 Glycine max
Glyma.09G240300 5.0kb downstream 5.0kb downstream 9550 true Chr09: 46273881-46283430 Glycine max
Glyma.09G240300 5.0kb downstream 5.0kb downstream 5000 false Chr09: 46278431-46283430 Glycine max
Glyma.09G240300 10.0kb upstream 10.0kb upstream 14550 true Chr09: 46263881-46278430 Glycine max
Glyma.09G240300 10.0kb upstream 10.0kb upstream 10000 false Chr09: 46263881-46273880 Glycine max
Glyma.09G240300 10.0kb downstream 10.0kb downstream 14550 true Chr09: 46273881-46288430 Glycine max
Glyma.09G240300 10.0kb downstream 10.0kb downstream 10000 false Chr09: 46278431-46288430 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301591 5265 Fabidae View MSA
124065072 5270 Rosid View MSA
123742149 5271 Pentapetalae View MSA
122786040 5272 Eudicot View MSA
122045239 5273 Angiosperm View MSA
121345158 5274 Embryophyte View MSA
123427776 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 49.764 0.0 229.72 High Low
cufflinks 52.2979 0.0 236.102 High  
cufflinks 53.1421 0.0 251.061 High  
cufflinks 73.4962 0.0 372.506 High  
cufflinks 74.9401 0.0 372.203 High  
cufflinks 82.5244 0.0 385.927 High High
cufflinks 48.2565 0.0 217.093 High Low
cufflinks 83.0222 0.0 438.382 High High
cufflinks 59.7279 0.0 281.912 High  
cufflinks 8.635     High High
cufflinks 3.237       Low
cufflinks 5.063        
cufflinks 8.551     High High
cufflinks 9.125     High High
cufflinks 2.432       Low
cufflinks 4.97        
cufflinks 3.623        
cufflinks 6.472        
cufflinks 5.382        
cufflinks 4.585        
cufflinks 4.142        
cufflinks 4.691        
cufflinks 4.525        
cufflinks 4.081        
cufflinks 4.578        
cufflinks 4.763        

0 Strain