Gene : Glyma.09G240400 G. max Wm82.a2.v1
Defline:  (1 of 354) PF00847 - AP2 domain (AP2) Genomic Order:  2404
Name:  ? Glyma.09G240400 Secondary Identifier:  ? PAC:30486374
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G240400 0.5kb upstream 0.5kb upstream 2555 true Chr09: 46283702-46286256 Glycine max
Glyma.09G240400 0.5kb upstream 0.5kb upstream 500 false Chr09: 46285757-46286256 Glycine max
Glyma.09G240400 0.5kb downstream 0.5kb downstream 2555 true Chr09: 46283202-46285756 Glycine max
Glyma.09G240400 0.5kb downstream 0.5kb downstream 500 false Chr09: 46283202-46283701 Glycine max
Glyma.09G240400 1.0kb upstream 1.0kb upstream 3055 true Chr09: 46283702-46286756 Glycine max
Glyma.09G240400 1.0kb upstream 1.0kb upstream 1000 false Chr09: 46285757-46286756 Glycine max
Glyma.09G240400 1.0kb downstream 1.0kb downstream 3055 true Chr09: 46282702-46285756 Glycine max
Glyma.09G240400 1.0kb downstream 1.0kb downstream 1000 false Chr09: 46282702-46283701 Glycine max
Glyma.09G240400 2.0kb upstream 2.0kb upstream 4055 true Chr09: 46283702-46287756 Glycine max
Glyma.09G240400 2.0kb upstream 2.0kb upstream 2000 false Chr09: 46285757-46287756 Glycine max
Glyma.09G240400 2.0kb downstream 2.0kb downstream 4055 true Chr09: 46281702-46285756 Glycine max
Glyma.09G240400 2.0kb downstream 2.0kb downstream 2000 false Chr09: 46281702-46283701 Glycine max
Glyma.09G240400 5.0kb upstream 5.0kb upstream 7055 true Chr09: 46283702-46290756 Glycine max
Glyma.09G240400 5.0kb upstream 5.0kb upstream 5000 false Chr09: 46285757-46290756 Glycine max
Glyma.09G240400 5.0kb downstream 5.0kb downstream 7055 true Chr09: 46278702-46285756 Glycine max
Glyma.09G240400 5.0kb downstream 5.0kb downstream 5000 false Chr09: 46278702-46283701 Glycine max
Glyma.09G240400 10.0kb upstream 10.0kb upstream 12055 true Chr09: 46283702-46295756 Glycine max
Glyma.09G240400 10.0kb upstream 10.0kb upstream 10000 false Chr09: 46285757-46295756 Glycine max
Glyma.09G240400 10.0kb downstream 10.0kb downstream 12055 true Chr09: 46273702-46285756 Glycine max
Glyma.09G240400 10.0kb downstream 10.0kb downstream 10000 false Chr09: 46273702-46283701 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311178 5265 Fabidae View MSA
124070741 5270 Rosid View MSA
123749624 5271 Pentapetalae View MSA
122795805 5272 Eudicot View MSA
122048142 5273 Angiosperm View MSA
123428898 5275 Viridiplantae View MSA
121350345 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.279959 0.0 1.0797    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0209154 0.0 0.0925782 Low Low
cufflinks 0.110567 0.0 0.441229 Low  
cufflinks 0.088304 0.0 0.355838 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0168815 0.0 0.0764051 Low Low
cufflinks 0.44947 0.0 1.69694   High
cufflinks 0.014     Low  
cufflinks 0.038     Low  
cufflinks 0.064     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.442       High
cufflinks 0.01     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.009     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.008     Low  
cufflinks 0.027     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.011     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain