Gene : Glyma.09G278200 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR32444:SF6 - D-MANNOSE BINDING LECTIN PROTEIN WITH APPLE-LIKE CARBOHYDRATE-BINDING DOMAIN Genomic Order:  2782
Name:  ? Glyma.09G278200 Secondary Identifier:  ? PAC:30482797
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G278200 0.5kb upstream 0.5kb upstream 2916 true Chr09: 49362681-49365596 Glycine max
Glyma.09G278200 0.5kb upstream 0.5kb upstream 500 false Chr09: 49365097-49365596 Glycine max
Glyma.09G278200 0.5kb downstream 0.5kb downstream 2916 true Chr09: 49362181-49365096 Glycine max
Glyma.09G278200 0.5kb downstream 0.5kb downstream 500 false Chr09: 49362181-49362680 Glycine max
Glyma.09G278200 1.0kb upstream 1.0kb upstream 3416 true Chr09: 49362681-49366096 Glycine max
Glyma.09G278200 1.0kb upstream 1.0kb upstream 1000 false Chr09: 49365097-49366096 Glycine max
Glyma.09G278200 1.0kb downstream 1.0kb downstream 3416 true Chr09: 49361681-49365096 Glycine max
Glyma.09G278200 1.0kb downstream 1.0kb downstream 1000 false Chr09: 49361681-49362680 Glycine max
Glyma.09G278200 2.0kb upstream 2.0kb upstream 4416 true Chr09: 49362681-49367096 Glycine max
Glyma.09G278200 2.0kb upstream 2.0kb upstream 2000 false Chr09: 49365097-49367096 Glycine max
Glyma.09G278200 2.0kb downstream 2.0kb downstream 4416 true Chr09: 49360681-49365096 Glycine max
Glyma.09G278200 2.0kb downstream 2.0kb downstream 2000 false Chr09: 49360681-49362680 Glycine max
Glyma.09G278200 5.0kb upstream 5.0kb upstream 7416 true Chr09: 49362681-49370096 Glycine max
Glyma.09G278200 5.0kb upstream 5.0kb upstream 5000 false Chr09: 49365097-49370096 Glycine max
Glyma.09G278200 5.0kb downstream 5.0kb downstream 7416 true Chr09: 49357681-49365096 Glycine max
Glyma.09G278200 5.0kb downstream 5.0kb downstream 5000 false Chr09: 49357681-49362680 Glycine max
Glyma.09G278200 10.0kb upstream 10.0kb upstream 12416 true Chr09: 49362681-49375096 Glycine max
Glyma.09G278200 10.0kb upstream 10.0kb upstream 10000 false Chr09: 49365097-49375096 Glycine max
Glyma.09G278200 10.0kb downstream 10.0kb downstream 12416 true Chr09: 49352681-49365096 Glycine max
Glyma.09G278200 10.0kb downstream 10.0kb downstream 10000 false Chr09: 49352681-49362680 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029223 5273 Angiosperm View MSA
122307403 5265 Fabidae View MSA
124061052 5270 Rosid View MSA
123746754 5271 Pentapetalae View MSA
122790978 5272 Eudicot View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.105099 0.0 0.41387 Low  
cufflinks 0.521218 0.0 1.91159   High
cufflinks 0.013548 0.0 0.059954 Low Low
cufflinks 0.174492 0.0 0.672872 Low  
cufflinks 0.0939555 0.0 0.371605 Low  
cufflinks 0.301148 0.0 1.13465    
cufflinks 0.142531 0.0 0.554955 Low  
cufflinks 0.318128 0.0 1.19536    
cufflinks 0.189169 0.0 0.727343 Low  
cufflinks 0.217        
cufflinks 0.008     Low Low
cufflinks 0.154        
cufflinks 0.06     Low  
cufflinks 0.035     Low  
cufflinks 0.008     Low Low
cufflinks 0.223        
cufflinks 0.062     Low  
cufflinks 0.16        
cufflinks 0.661       High
cufflinks 0.073     Low  
cufflinks 0.009     Low Low
cufflinks 0.169        
cufflinks 0.211        
cufflinks 0.007     Low Low
cufflinks 0.232        
cufflinks 0.023     Low  

0 Strain