Gene : Glyma.09G279900 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR12902:SF12 - PROTEIN SCAR2-RELATED Genomic Order:  2799
Name:  ? Glyma.09G279900 Secondary Identifier:  ? PAC:30483671
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G279900 0.5kb upstream 0.5kb upstream 7481 true Chr09: 49521619-49529099 Glycine max
Glyma.09G279900 0.5kb upstream 0.5kb upstream 500 false Chr09: 49521619-49522118 Glycine max
Glyma.09G279900 0.5kb downstream 0.5kb downstream 7481 true Chr09: 49522119-49529599 Glycine max
Glyma.09G279900 0.5kb downstream 0.5kb downstream 500 false Chr09: 49529100-49529599 Glycine max
Glyma.09G279900 1.0kb upstream 1.0kb upstream 7981 true Chr09: 49521119-49529099 Glycine max
Glyma.09G279900 1.0kb upstream 1.0kb upstream 1000 false Chr09: 49521119-49522118 Glycine max
Glyma.09G279900 1.0kb downstream 1.0kb downstream 7981 true Chr09: 49522119-49530099 Glycine max
Glyma.09G279900 1.0kb downstream 1.0kb downstream 1000 false Chr09: 49529100-49530099 Glycine max
Glyma.09G279900 2.0kb upstream 2.0kb upstream 8981 true Chr09: 49520119-49529099 Glycine max
Glyma.09G279900 2.0kb upstream 2.0kb upstream 2000 false Chr09: 49520119-49522118 Glycine max
Glyma.09G279900 2.0kb downstream 2.0kb downstream 8981 true Chr09: 49522119-49531099 Glycine max
Glyma.09G279900 2.0kb downstream 2.0kb downstream 2000 false Chr09: 49529100-49531099 Glycine max
Glyma.09G279900 5.0kb upstream 5.0kb upstream 11981 true Chr09: 49517119-49529099 Glycine max
Glyma.09G279900 5.0kb upstream 5.0kb upstream 5000 false Chr09: 49517119-49522118 Glycine max
Glyma.09G279900 5.0kb downstream 5.0kb downstream 11981 true Chr09: 49522119-49534099 Glycine max
Glyma.09G279900 5.0kb downstream 5.0kb downstream 5000 false Chr09: 49529100-49534099 Glycine max
Glyma.09G279900 10.0kb upstream 10.0kb upstream 16981 true Chr09: 49512119-49529099 Glycine max
Glyma.09G279900 10.0kb upstream 10.0kb upstream 10000 false Chr09: 49512119-49522118 Glycine max
Glyma.09G279900 10.0kb downstream 10.0kb downstream 16981 true Chr09: 49522119-49539099 Glycine max
Glyma.09G279900 10.0kb downstream 10.0kb downstream 10000 false Chr09: 49529100-49539099 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313394 5265 Fabidae View MSA
124065878 5270 Rosid View MSA
123743804 5271 Pentapetalae View MSA
122797754 5272 Eudicot View MSA
122043443 5273 Angiosperm View MSA
121351143 5274 Embryophyte View MSA
123382024 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.663057 0.0 3.22699   Low
cufflinks 2.36301 0.0 7.83368    
cufflinks 0.846861 0.0 3.79797   Low
cufflinks 4.49274 0.0 14.0022    
cufflinks 1.28101 0.0 5.07674    
cufflinks 3.42965 0.0 10.5275    
cufflinks 2.81947 0.0 9.21357    
cufflinks 9.45166 0.0 29.2226   High
cufflinks 3.07379 0.0 9.86576    
cufflinks 2.387       High
cufflinks 0.103       Low
cufflinks 0.782        
cufflinks 0.85        
cufflinks 0.382        
cufflinks 0.105       Low
cufflinks 0.633        
cufflinks 0.695        
cufflinks 1.776       High
cufflinks 1.566       High
cufflinks 0.482        
cufflinks 0.203       Low
cufflinks 0.637        
cufflinks 1.215        
cufflinks 0.187       Low
cufflinks 0.462        
cufflinks 0.292        

0 Strain