Gene : Glyma.09G280200 G. max Wm82.a2.v1
Defline:  (1 of 9) PTHR31221:SF1 - WRKY TRANSCRIPTION FACTOR 1-RELATED Genomic Order:  2802
Name:  ? Glyma.09G280200 Secondary Identifier:  ? PAC:30483790
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G280200 0.5kb upstream 0.5kb upstream 4605 true Chr09: 49542695-49547299 Glycine max
Glyma.09G280200 0.5kb upstream 0.5kb upstream 500 false Chr09: 49542695-49543194 Glycine max
Glyma.09G280200 0.5kb downstream 0.5kb downstream 4605 true Chr09: 49543195-49547799 Glycine max
Glyma.09G280200 0.5kb downstream 0.5kb downstream 500 false Chr09: 49547300-49547799 Glycine max
Glyma.09G280200 1.0kb upstream 1.0kb upstream 5105 true Chr09: 49542195-49547299 Glycine max
Glyma.09G280200 1.0kb upstream 1.0kb upstream 1000 false Chr09: 49542195-49543194 Glycine max
Glyma.09G280200 1.0kb downstream 1.0kb downstream 5105 true Chr09: 49543195-49548299 Glycine max
Glyma.09G280200 1.0kb downstream 1.0kb downstream 1000 false Chr09: 49547300-49548299 Glycine max
Glyma.09G280200 2.0kb upstream 2.0kb upstream 6105 true Chr09: 49541195-49547299 Glycine max
Glyma.09G280200 2.0kb upstream 2.0kb upstream 2000 false Chr09: 49541195-49543194 Glycine max
Glyma.09G280200 2.0kb downstream 2.0kb downstream 6105 true Chr09: 49543195-49549299 Glycine max
Glyma.09G280200 2.0kb downstream 2.0kb downstream 2000 false Chr09: 49547300-49549299 Glycine max
Glyma.09G280200 5.0kb upstream 5.0kb upstream 9105 true Chr09: 49538195-49547299 Glycine max
Glyma.09G280200 5.0kb upstream 5.0kb upstream 5000 false Chr09: 49538195-49543194 Glycine max
Glyma.09G280200 5.0kb downstream 5.0kb downstream 9105 true Chr09: 49543195-49552299 Glycine max
Glyma.09G280200 5.0kb downstream 5.0kb downstream 5000 false Chr09: 49547300-49552299 Glycine max
Glyma.09G280200 10.0kb upstream 10.0kb upstream 14105 true Chr09: 49533195-49547299 Glycine max
Glyma.09G280200 10.0kb upstream 10.0kb upstream 10000 false Chr09: 49533195-49543194 Glycine max
Glyma.09G280200 10.0kb downstream 10.0kb downstream 14105 true Chr09: 49543195-49557299 Glycine max
Glyma.09G280200 10.0kb downstream 10.0kb downstream 10000 false Chr09: 49547300-49557299 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296208 5265 Fabidae View MSA
124071256 5270 Rosid View MSA
123740881 5271 Pentapetalae View MSA
122792726 5272 Eudicot View MSA
122046971 5273 Angiosperm View MSA
121349380 5274 Embryophyte View MSA
123428268 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.79173 0.0 39.3304   High
cufflinks 0.291194 0.0 2.2708    
cufflinks 3.74858 0.0 18.6486    
cufflinks 0.0442909 0.0 0.182825 Low Low
cufflinks 1.56486 0.0 8.21264    
cufflinks 10.2815 0.0 44.6215   High
cufflinks 0.109316 0.0 0.429712 Low Low
cufflinks 0.597494 0.0 4.29864    
cufflinks 3.62894 0.0 22.2966    
cufflinks 0.28        
cufflinks 1.242       High
cufflinks 0.382        
cufflinks 0.621        
cufflinks 0.089        
cufflinks 0.726       High
cufflinks 0.13        
cufflinks 0.556        
cufflinks 0.074     Low Low
cufflinks 0.192        
cufflinks 0.028     Low Low
cufflinks 0.433        
cufflinks 0.187        
cufflinks 0.102     Low  
cufflinks 0.952       High
cufflinks 0.054     Low Low
cufflinks 0.419        

0 Strain