Gene : Glyma.09G280300 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11615//PTHR11615:SF144 - NITRATE, FROMATE, IRON DEHYDROGENASE Genomic Order:  2803
Name:  ? Glyma.09G280300 Secondary Identifier:  ? PAC:30486369
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G280300 0.5kb upstream 0.5kb upstream 3743 true Chr09: 49547489-49551231 Glycine max
Glyma.09G280300 0.5kb upstream 0.5kb upstream 500 false Chr09: 49550732-49551231 Glycine max
Glyma.09G280300 0.5kb downstream 0.5kb downstream 3743 true Chr09: 49546989-49550731 Glycine max
Glyma.09G280300 0.5kb downstream 0.5kb downstream 500 false Chr09: 49546989-49547488 Glycine max
Glyma.09G280300 1.0kb upstream 1.0kb upstream 4243 true Chr09: 49547489-49551731 Glycine max
Glyma.09G280300 1.0kb upstream 1.0kb upstream 1000 false Chr09: 49550732-49551731 Glycine max
Glyma.09G280300 1.0kb downstream 1.0kb downstream 4243 true Chr09: 49546489-49550731 Glycine max
Glyma.09G280300 1.0kb downstream 1.0kb downstream 1000 false Chr09: 49546489-49547488 Glycine max
Glyma.09G280300 2.0kb upstream 2.0kb upstream 5243 true Chr09: 49547489-49552731 Glycine max
Glyma.09G280300 2.0kb upstream 2.0kb upstream 2000 false Chr09: 49550732-49552731 Glycine max
Glyma.09G280300 2.0kb downstream 2.0kb downstream 5243 true Chr09: 49545489-49550731 Glycine max
Glyma.09G280300 2.0kb downstream 2.0kb downstream 2000 false Chr09: 49545489-49547488 Glycine max
Glyma.09G280300 5.0kb upstream 5.0kb upstream 8243 true Chr09: 49547489-49555731 Glycine max
Glyma.09G280300 5.0kb upstream 5.0kb upstream 5000 false Chr09: 49550732-49555731 Glycine max
Glyma.09G280300 5.0kb downstream 5.0kb downstream 8243 true Chr09: 49542489-49550731 Glycine max
Glyma.09G280300 5.0kb downstream 5.0kb downstream 5000 false Chr09: 49542489-49547488 Glycine max
Glyma.09G280300 10.0kb upstream 10.0kb upstream 13243 true Chr09: 49547489-49560731 Glycine max
Glyma.09G280300 10.0kb upstream 10.0kb upstream 10000 false Chr09: 49550732-49560731 Glycine max
Glyma.09G280300 10.0kb downstream 10.0kb downstream 13243 true Chr09: 49537489-49550731 Glycine max
Glyma.09G280300 10.0kb downstream 10.0kb downstream 10000 false Chr09: 49537489-49547488 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310508 5265 Fabidae View MSA
124068306 5270 Rosid View MSA
123750880 5271 Pentapetalae View MSA
122792969 5272 Eudicot View MSA
122047644 5273 Angiosperm View MSA
121351377 5274 Embryophyte View MSA
123382143 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0184495 0.0 0.0834382 Low Low
cufflinks 0.323696 0.0 1.24348    
cufflinks 2.45191 0.0 8.26191   High
cufflinks 0.0199666 0.0 0.0895947 Low Low
cufflinks 0.677223 0.0 2.51379    
cufflinks 3.1625 0.0 10.3121   High
cufflinks 0.27448 0.0 1.062    
cufflinks 0.0554765 0.0 0.229741 Low  
cufflinks 0.529329 0.0 1.98865    
cufflinks 0.089     Low  
cufflinks 0.118        
cufflinks 0.372       High
cufflinks 0.355       High
cufflinks 0.335       High
cufflinks 0.153        
cufflinks 0.06     Low  
cufflinks 0.026     Low Low
cufflinks 0.065     Low  
cufflinks 0.072     Low  
cufflinks 0.012     Low Low
cufflinks 0.117        
cufflinks 0.025     Low Low
cufflinks 0.037     Low  
cufflinks 0.095        
cufflinks 0.017     Low Low
cufflinks 0.112        

0 Strain