Gene : Glyma.09G281400 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR22883:SF35 - PALMITOYLTRANSFERASE ZDHHC6 Genomic Order:  2814
Name:  ? Glyma.09G281400 Secondary Identifier:  ? PAC:30486588
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G281400 0.5kb upstream 0.5kb upstream 7732 true Chr09: 49668985-49676716 Glycine max
Glyma.09G281400 0.5kb upstream 0.5kb upstream 500 false Chr09: 49676217-49676716 Glycine max
Glyma.09G281400 0.5kb downstream 0.5kb downstream 7732 true Chr09: 49668485-49676216 Glycine max
Glyma.09G281400 0.5kb downstream 0.5kb downstream 500 false Chr09: 49668485-49668984 Glycine max
Glyma.09G281400 1.0kb upstream 1.0kb upstream 8232 true Chr09: 49668985-49677216 Glycine max
Glyma.09G281400 1.0kb upstream 1.0kb upstream 1000 false Chr09: 49676217-49677216 Glycine max
Glyma.09G281400 1.0kb downstream 1.0kb downstream 8232 true Chr09: 49667985-49676216 Glycine max
Glyma.09G281400 1.0kb downstream 1.0kb downstream 1000 false Chr09: 49667985-49668984 Glycine max
Glyma.09G281400 2.0kb upstream 2.0kb upstream 9232 true Chr09: 49668985-49678216 Glycine max
Glyma.09G281400 2.0kb upstream 2.0kb upstream 2000 false Chr09: 49676217-49678216 Glycine max
Glyma.09G281400 2.0kb downstream 2.0kb downstream 9232 true Chr09: 49666985-49676216 Glycine max
Glyma.09G281400 2.0kb downstream 2.0kb downstream 2000 false Chr09: 49666985-49668984 Glycine max
Glyma.09G281400 5.0kb upstream 5.0kb upstream 12232 true Chr09: 49668985-49681216 Glycine max
Glyma.09G281400 5.0kb upstream 5.0kb upstream 5000 false Chr09: 49676217-49681216 Glycine max
Glyma.09G281400 5.0kb downstream 5.0kb downstream 12232 true Chr09: 49663985-49676216 Glycine max
Glyma.09G281400 5.0kb downstream 5.0kb downstream 5000 false Chr09: 49663985-49668984 Glycine max
Glyma.09G281400 10.0kb upstream 10.0kb upstream 17232 true Chr09: 49668985-49686216 Glycine max
Glyma.09G281400 10.0kb upstream 10.0kb upstream 10000 false Chr09: 49676217-49686216 Glycine max
Glyma.09G281400 10.0kb downstream 10.0kb downstream 17232 true Chr09: 49658985-49676216 Glycine max
Glyma.09G281400 10.0kb downstream 10.0kb downstream 10000 false Chr09: 49658985-49668984 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315342 5265 Fabidae View MSA
124074562 5270 Rosid View MSA
123740420 5271 Pentapetalae View MSA
122789701 5272 Eudicot View MSA
122042065 5273 Angiosperm View MSA
121349968 5274 Embryophyte View MSA
123428148 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.49604 0.0 11.5498    
cufflinks 2.12836 0.0 10.2712    
cufflinks 2.4639 0.0 11.3464    
cufflinks 2.02832 0.0 9.96844    
cufflinks 2.15595 0.0 10.4539    
cufflinks 3.52517 0.0 14.4734   High
cufflinks 1.52242 0.0 8.0781   Low
cufflinks 2.55434 0.0 11.6924    
cufflinks 2.95565 0.0 12.8802    
cufflinks 0.157       Low
cufflinks 0.302       High
cufflinks 0.255        
cufflinks 0.188        
cufflinks 0.232        
cufflinks 0.26        
cufflinks 0.205        
cufflinks 0.165       Low
cufflinks 0.279        
cufflinks 0.226        
cufflinks 0.242        
cufflinks 0.34       High
cufflinks 0.247        
cufflinks 0.19        
cufflinks 0.362       High
cufflinks 0.221        
cufflinks 0.244        

0 Strain