Gene : Glyma.09G282400 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR20932:SF8 - PEPTIDOGLYCAN-BINDING LYSM DOMAIN-CONTAINING PROTEIN Genomic Order:  2824
Name:  ? Glyma.09G282400 Secondary Identifier:  ? PAC:30482704
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G282400 0.5kb upstream 0.5kb upstream 4651 true Chr09: 49794464-49799114 Glycine max
Glyma.09G282400 0.5kb upstream 0.5kb upstream 500 false Chr09: 49794464-49794963 Glycine max
Glyma.09G282400 0.5kb downstream 0.5kb downstream 4651 true Chr09: 49794964-49799614 Glycine max
Glyma.09G282400 0.5kb downstream 0.5kb downstream 500 false Chr09: 49799115-49799614 Glycine max
Glyma.09G282400 1.0kb upstream 1.0kb upstream 5151 true Chr09: 49793964-49799114 Glycine max
Glyma.09G282400 1.0kb upstream 1.0kb upstream 1000 false Chr09: 49793964-49794963 Glycine max
Glyma.09G282400 1.0kb downstream 1.0kb downstream 5151 true Chr09: 49794964-49800114 Glycine max
Glyma.09G282400 1.0kb downstream 1.0kb downstream 1000 false Chr09: 49799115-49800114 Glycine max
Glyma.09G282400 2.0kb upstream 2.0kb upstream 6151 true Chr09: 49792964-49799114 Glycine max
Glyma.09G282400 2.0kb upstream 2.0kb upstream 2000 false Chr09: 49792964-49794963 Glycine max
Glyma.09G282400 2.0kb downstream 2.0kb downstream 6151 true Chr09: 49794964-49801114 Glycine max
Glyma.09G282400 2.0kb downstream 2.0kb downstream 2000 false Chr09: 49799115-49801114 Glycine max
Glyma.09G282400 5.0kb upstream 5.0kb upstream 9151 true Chr09: 49789964-49799114 Glycine max
Glyma.09G282400 5.0kb upstream 5.0kb upstream 5000 false Chr09: 49789964-49794963 Glycine max
Glyma.09G282400 5.0kb downstream 5.0kb downstream 9151 true Chr09: 49794964-49804114 Glycine max
Glyma.09G282400 5.0kb downstream 5.0kb downstream 5000 false Chr09: 49799115-49804114 Glycine max
Glyma.09G282400 10.0kb upstream 10.0kb upstream 14151 true Chr09: 49784964-49799114 Glycine max
Glyma.09G282400 10.0kb upstream 10.0kb upstream 10000 false Chr09: 49784964-49794963 Glycine max
Glyma.09G282400 10.0kb downstream 10.0kb downstream 14151 true Chr09: 49794964-49809114 Glycine max
Glyma.09G282400 10.0kb downstream 10.0kb downstream 10000 false Chr09: 49799115-49809114 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040928 5273 Angiosperm View MSA
122308369 5265 Fabidae View MSA
124070010 5270 Rosid View MSA
123744886 5271 Pentapetalae View MSA
122793061 5272 Eudicot View MSA
121350889 5274 Embryophyte View MSA
123426344 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.07107 0.0 13.7552    
cufflinks 1.80835 0.0 10.3454   Low
cufflinks 3.17537 0.0 13.7149    
cufflinks 2.48659 0.0 11.894    
cufflinks 2.32857 0.0 8.02932    
cufflinks 2.82518 0.0 12.7369    
cufflinks 3.83697 0.0 15.649   High
cufflinks 2.1828 0.0 10.5475    
cufflinks 2.30814 0.0 11.1681    
cufflinks 0.631        
cufflinks 1.417       High
cufflinks 0.753        
cufflinks 0.584        
cufflinks 0.364       Low
cufflinks 1.171        
cufflinks 0.379       Low
cufflinks 2.48       High
cufflinks 0.669        
cufflinks 0.374       Low
cufflinks 0.397        
cufflinks 1.056        
cufflinks 0.51        
cufflinks 0.436        
cufflinks 1.413       High
cufflinks 0.388       Low
cufflinks 1.38       High

0 Strain