Gene : Glyma.09G273400 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11452:SF18 - ALPHA-GALACTOSIDASE 1 Genomic Order:  2734
Name:  ? Glyma.09G273400 Secondary Identifier:  ? PAC:30482681
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY0-1301 Glycine max pathologic  
Gmax PWY-6527 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G273400 0.5kb upstream 0.5kb upstream 4719 true Chr09: 48962591-48967309 Glycine max
Glyma.09G273400 0.5kb upstream 0.5kb upstream 500 false Chr09: 48966810-48967309 Glycine max
Glyma.09G273400 0.5kb downstream 0.5kb downstream 4719 true Chr09: 48962091-48966809 Glycine max
Glyma.09G273400 0.5kb downstream 0.5kb downstream 500 false Chr09: 48962091-48962590 Glycine max
Glyma.09G273400 1.0kb upstream 1.0kb upstream 5219 true Chr09: 48962591-48967809 Glycine max
Glyma.09G273400 1.0kb upstream 1.0kb upstream 1000 false Chr09: 48966810-48967809 Glycine max
Glyma.09G273400 1.0kb downstream 1.0kb downstream 5219 true Chr09: 48961591-48966809 Glycine max
Glyma.09G273400 1.0kb downstream 1.0kb downstream 1000 false Chr09: 48961591-48962590 Glycine max
Glyma.09G273400 2.0kb upstream 2.0kb upstream 6219 true Chr09: 48962591-48968809 Glycine max
Glyma.09G273400 2.0kb upstream 2.0kb upstream 2000 false Chr09: 48966810-48968809 Glycine max
Glyma.09G273400 2.0kb downstream 2.0kb downstream 6219 true Chr09: 48960591-48966809 Glycine max
Glyma.09G273400 2.0kb downstream 2.0kb downstream 2000 false Chr09: 48960591-48962590 Glycine max
Glyma.09G273400 5.0kb upstream 5.0kb upstream 9219 true Chr09: 48962591-48971809 Glycine max
Glyma.09G273400 5.0kb upstream 5.0kb upstream 5000 false Chr09: 48966810-48971809 Glycine max
Glyma.09G273400 5.0kb downstream 5.0kb downstream 9219 true Chr09: 48957591-48966809 Glycine max
Glyma.09G273400 5.0kb downstream 5.0kb downstream 5000 false Chr09: 48957591-48962590 Glycine max
Glyma.09G273400 10.0kb upstream 10.0kb upstream 14219 true Chr09: 48962591-48976809 Glycine max
Glyma.09G273400 10.0kb upstream 10.0kb upstream 10000 false Chr09: 48966810-48976809 Glycine max
Glyma.09G273400 10.0kb downstream 10.0kb downstream 14219 true Chr09: 48952591-48966809 Glycine max
Glyma.09G273400 10.0kb downstream 10.0kb downstream 10000 false Chr09: 48952591-48962590 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315044 5265 Fabidae View MSA
124069485 5270 Rosid View MSA
123749303 5271 Pentapetalae View MSA
122796981 5272 Eudicot View MSA
122048958 5273 Angiosperm View MSA
121347217 5274 Embryophyte View MSA
123428348 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.245533 0.0 0.93766   Low
cufflinks 14.2197 0.0 38.0272    
cufflinks 3.12051 0.0 9.53324    
cufflinks 46.16 0.0 129.749 High  
cufflinks 18.6783 0.0 49.8344    
cufflinks 6.74528 0.0 18.87    
cufflinks 163.211 0.0 566.919 High High
cufflinks 1.33828 0.0 4.60154    
cufflinks 5.40131 0.0 15.464    
cufflinks 3.776        
cufflinks 0.852        
cufflinks 7.543     High  
cufflinks 5.702        
cufflinks 2.286        
cufflinks 0.125       Low
cufflinks 12.732     High  
cufflinks 1.077        
cufflinks 14.235     High High
cufflinks 5.882        
cufflinks 9.192     High  
cufflinks 0.815        
cufflinks 11.063     High  
cufflinks 10.691     High  
cufflinks 0.205       Low
cufflinks 10.322     High  
cufflinks 0.829        

0 Strain