Gene : Glyma.09G275000 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR30053:SF3 - ELONGATION FACTOR EF-P Genomic Order:  2750
Name:  ? Glyma.09G275000 Secondary Identifier:  ? PAC:30486202
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Ontology Annotation Displayer

0 Pathways

Genomics

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Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G275000 0.5kb upstream 0.5kb upstream 4090 true Chr09: 49074663-49078752 Glycine max
Glyma.09G275000 0.5kb upstream 0.5kb upstream 500 false Chr09: 49078253-49078752 Glycine max
Glyma.09G275000 0.5kb downstream 0.5kb downstream 4090 true Chr09: 49074163-49078252 Glycine max
Glyma.09G275000 0.5kb downstream 0.5kb downstream 500 false Chr09: 49074163-49074662 Glycine max
Glyma.09G275000 1.0kb upstream 1.0kb upstream 4590 true Chr09: 49074663-49079252 Glycine max
Glyma.09G275000 1.0kb upstream 1.0kb upstream 1000 false Chr09: 49078253-49079252 Glycine max
Glyma.09G275000 1.0kb downstream 1.0kb downstream 4590 true Chr09: 49073663-49078252 Glycine max
Glyma.09G275000 1.0kb downstream 1.0kb downstream 1000 false Chr09: 49073663-49074662 Glycine max
Glyma.09G275000 2.0kb upstream 2.0kb upstream 5590 true Chr09: 49074663-49080252 Glycine max
Glyma.09G275000 2.0kb upstream 2.0kb upstream 2000 false Chr09: 49078253-49080252 Glycine max
Glyma.09G275000 2.0kb downstream 2.0kb downstream 5590 true Chr09: 49072663-49078252 Glycine max
Glyma.09G275000 2.0kb downstream 2.0kb downstream 2000 false Chr09: 49072663-49074662 Glycine max
Glyma.09G275000 5.0kb upstream 5.0kb upstream 8590 true Chr09: 49074663-49083252 Glycine max
Glyma.09G275000 5.0kb upstream 5.0kb upstream 5000 false Chr09: 49078253-49083252 Glycine max
Glyma.09G275000 5.0kb downstream 5.0kb downstream 8590 true Chr09: 49069663-49078252 Glycine max
Glyma.09G275000 5.0kb downstream 5.0kb downstream 5000 false Chr09: 49069663-49074662 Glycine max
Glyma.09G275000 10.0kb upstream 10.0kb upstream 13590 true Chr09: 49074663-49088252 Glycine max
Glyma.09G275000 10.0kb upstream 10.0kb upstream 10000 false Chr09: 49078253-49088252 Glycine max
Glyma.09G275000 10.0kb downstream 10.0kb downstream 13590 true Chr09: 49064663-49078252 Glycine max
Glyma.09G275000 10.0kb downstream 10.0kb downstream 10000 false Chr09: 49064663-49074662 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303402 5265 Fabidae View MSA
124067724 5270 Rosid View MSA
123738931 5271 Pentapetalae View MSA
122789538 5272 Eudicot View MSA
122051510 5273 Angiosperm View MSA
121347345 5274 Embryophyte View MSA
123424551 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.65379 0.0 13.3783    
cufflinks 6.77375 0.0 25.3535   High
cufflinks 1.22061 0.0 7.14761   Low
cufflinks 3.4503 0.0 16.1735    
cufflinks 2.72196 0.0 13.5684    
cufflinks 2.32901 0.0 12.104    
cufflinks 8.46676 0.0 29.8665   High
cufflinks 2.32092 0.0 12.2228    
cufflinks 2.20716 0.0 11.5853    
cufflinks 0.55        
cufflinks 0.083       Low
cufflinks 0.597        
cufflinks 0.393        
cufflinks 0.608        
cufflinks 0.1       Low
cufflinks 2.129       High
cufflinks 0.207        
cufflinks 0.78        
cufflinks 1.007        
cufflinks 2.395       High
cufflinks 0.118       Low
cufflinks 2.226       High
cufflinks 2.728       High
cufflinks 0.096       Low
cufflinks 2.462       High
cufflinks 0.143       Low

0 Strain