Gene : Glyma.09G275300 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR14155:SF74 - RING-H2 FINGER PROTEIN ATL45-RELATED Genomic Order:  2753
Name:  ? Glyma.09G275300 Secondary Identifier:  ? PAC:30486978
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G275300 0.5kb upstream 0.5kb upstream 2829 true Chr09: 49094668-49097496 Glycine max
Glyma.09G275300 0.5kb upstream 0.5kb upstream 500 false Chr09: 49096997-49097496 Glycine max
Glyma.09G275300 0.5kb downstream 0.5kb downstream 2829 true Chr09: 49094168-49096996 Glycine max
Glyma.09G275300 0.5kb downstream 0.5kb downstream 500 false Chr09: 49094168-49094667 Glycine max
Glyma.09G275300 1.0kb upstream 1.0kb upstream 3329 true Chr09: 49094668-49097996 Glycine max
Glyma.09G275300 1.0kb upstream 1.0kb upstream 1000 false Chr09: 49096997-49097996 Glycine max
Glyma.09G275300 1.0kb downstream 1.0kb downstream 3329 true Chr09: 49093668-49096996 Glycine max
Glyma.09G275300 1.0kb downstream 1.0kb downstream 1000 false Chr09: 49093668-49094667 Glycine max
Glyma.09G275300 2.0kb upstream 2.0kb upstream 4329 true Chr09: 49094668-49098996 Glycine max
Glyma.09G275300 2.0kb upstream 2.0kb upstream 2000 false Chr09: 49096997-49098996 Glycine max
Glyma.09G275300 2.0kb downstream 2.0kb downstream 4329 true Chr09: 49092668-49096996 Glycine max
Glyma.09G275300 2.0kb downstream 2.0kb downstream 2000 false Chr09: 49092668-49094667 Glycine max
Glyma.09G275300 5.0kb upstream 5.0kb upstream 7329 true Chr09: 49094668-49101996 Glycine max
Glyma.09G275300 5.0kb upstream 5.0kb upstream 5000 false Chr09: 49096997-49101996 Glycine max
Glyma.09G275300 5.0kb downstream 5.0kb downstream 7329 true Chr09: 49089668-49096996 Glycine max
Glyma.09G275300 5.0kb downstream 5.0kb downstream 5000 false Chr09: 49089668-49094667 Glycine max
Glyma.09G275300 10.0kb upstream 10.0kb upstream 12329 true Chr09: 49094668-49106996 Glycine max
Glyma.09G275300 10.0kb upstream 10.0kb upstream 10000 false Chr09: 49096997-49106996 Glycine max
Glyma.09G275300 10.0kb downstream 10.0kb downstream 12329 true Chr09: 49084668-49096996 Glycine max
Glyma.09G275300 10.0kb downstream 10.0kb downstream 10000 false Chr09: 49084668-49094667 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311003 5265 Fabidae View MSA
124069529 5270 Rosid View MSA
123753111 5271 Pentapetalae View MSA
122797850 5272 Eudicot View MSA
122051603 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121351603 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 62.293 0.0 251.334 High High
cufflinks 3.99605 0.0 12.1624    
cufflinks 2.22951 0.0 8.2306    
cufflinks 3.64816 0.0 11.4481    
cufflinks 1.89492 0.0 9.48052    
cufflinks 1.37312 0.0 7.48652    
cufflinks 3.66265 0.0 15.3861    
cufflinks 4.92958 0.0 18.6606    
cufflinks 3.08285 0.0 13.6368    
cufflinks 0.422        
cufflinks 0.032     Low Low
cufflinks 0.601        
cufflinks 0.535        
cufflinks 0.098        
cufflinks 0.092       Low
cufflinks 1.87        
cufflinks 0.071       Low
cufflinks 1.79        
cufflinks 1.084        
cufflinks 3.659       High
cufflinks 0.171        
cufflinks 3.026       High
cufflinks 1.899        
cufflinks 0.148        
cufflinks 2.022        
cufflinks 0.086       Low

0 Strain