Gene : Glyma.09G267500 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR23074:SF86 - SPASTIN Genomic Order:  2675
Name:  ? Glyma.09G267500 Secondary Identifier:  ? PAC:30483271
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G267500 0.5kb upstream 0.5kb upstream 6532 true Chr09: 48529291-48535822 Glycine max
Glyma.09G267500 0.5kb upstream 0.5kb upstream 500 false Chr09: 48529291-48529790 Glycine max
Glyma.09G267500 0.5kb downstream 0.5kb downstream 6532 true Chr09: 48529791-48536322 Glycine max
Glyma.09G267500 0.5kb downstream 0.5kb downstream 500 false Chr09: 48535823-48536322 Glycine max
Glyma.09G267500 1.0kb upstream 1.0kb upstream 7032 true Chr09: 48528791-48535822 Glycine max
Glyma.09G267500 1.0kb upstream 1.0kb upstream 1000 false Chr09: 48528791-48529790 Glycine max
Glyma.09G267500 1.0kb downstream 1.0kb downstream 7032 true Chr09: 48529791-48536822 Glycine max
Glyma.09G267500 1.0kb downstream 1.0kb downstream 1000 false Chr09: 48535823-48536822 Glycine max
Glyma.09G267500 2.0kb upstream 2.0kb upstream 8032 true Chr09: 48527791-48535822 Glycine max
Glyma.09G267500 2.0kb upstream 2.0kb upstream 2000 false Chr09: 48527791-48529790 Glycine max
Glyma.09G267500 2.0kb downstream 2.0kb downstream 8032 true Chr09: 48529791-48537822 Glycine max
Glyma.09G267500 2.0kb downstream 2.0kb downstream 2000 false Chr09: 48535823-48537822 Glycine max
Glyma.09G267500 5.0kb upstream 5.0kb upstream 11032 true Chr09: 48524791-48535822 Glycine max
Glyma.09G267500 5.0kb upstream 5.0kb upstream 5000 false Chr09: 48524791-48529790 Glycine max
Glyma.09G267500 5.0kb downstream 5.0kb downstream 11032 true Chr09: 48529791-48540822 Glycine max
Glyma.09G267500 5.0kb downstream 5.0kb downstream 5000 false Chr09: 48535823-48540822 Glycine max
Glyma.09G267500 10.0kb upstream 10.0kb upstream 16032 true Chr09: 48519791-48535822 Glycine max
Glyma.09G267500 10.0kb upstream 10.0kb upstream 10000 false Chr09: 48519791-48529790 Glycine max
Glyma.09G267500 10.0kb downstream 10.0kb downstream 16032 true Chr09: 48529791-48545822 Glycine max
Glyma.09G267500 10.0kb downstream 10.0kb downstream 10000 false Chr09: 48535823-48545822 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300232 5265 Fabidae View MSA
124063142 5270 Rosid View MSA
123736430 5271 Pentapetalae View MSA
122793847 5272 Eudicot View MSA
122042209 5273 Angiosperm View MSA
123428918 5275 Viridiplantae View MSA
121344282 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.91357 0.0 14.2813    
cufflinks 3.31828 0.0 15.5711    
cufflinks 4.61692 0.0 19.7574   High
cufflinks 3.15566 0.0 12.2273    
cufflinks 3.13123 0.0 15.0894    
cufflinks 4.12918 0.0 14.8393    
cufflinks 2.93914 0.0 11.7949   Low
cufflinks 3.27116 0.0 15.0132    
cufflinks 4.51482 0.0 15.818   High
cufflinks 0.417       Low
cufflinks 0.437        
cufflinks 0.585        
cufflinks 0.476        
cufflinks 0.409       Low
cufflinks 0.834       High
cufflinks 0.511        
cufflinks 0.416       Low
cufflinks 0.68       High
cufflinks 0.532        
cufflinks 0.537        
cufflinks 0.405       Low
cufflinks 0.558        
cufflinks 0.473        
cufflinks 0.528        
cufflinks 0.49        
cufflinks 0.464        

0 Strain