Gene : Glyma.09G268100 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR33601:SF1 - LITTLE ZIPPER 1 PROTEIN-RELATED Genomic Order:  2681
Name:  ? Glyma.09G268100 Secondary Identifier:  ? PAC:30482758
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G268100 0.5kb upstream 0.5kb upstream 1849 true Chr09: 48570132-48571980 Glycine max
Glyma.09G268100 0.5kb upstream 0.5kb upstream 500 false Chr09: 48570132-48570631 Glycine max
Glyma.09G268100 0.5kb downstream 0.5kb downstream 1849 true Chr09: 48570632-48572480 Glycine max
Glyma.09G268100 0.5kb downstream 0.5kb downstream 500 false Chr09: 48571981-48572480 Glycine max
Glyma.09G268100 1.0kb upstream 1.0kb upstream 2349 true Chr09: 48569632-48571980 Glycine max
Glyma.09G268100 1.0kb upstream 1.0kb upstream 1000 false Chr09: 48569632-48570631 Glycine max
Glyma.09G268100 1.0kb downstream 1.0kb downstream 2349 true Chr09: 48570632-48572980 Glycine max
Glyma.09G268100 1.0kb downstream 1.0kb downstream 1000 false Chr09: 48571981-48572980 Glycine max
Glyma.09G268100 2.0kb upstream 2.0kb upstream 3349 true Chr09: 48568632-48571980 Glycine max
Glyma.09G268100 2.0kb upstream 2.0kb upstream 2000 false Chr09: 48568632-48570631 Glycine max
Glyma.09G268100 2.0kb downstream 2.0kb downstream 3349 true Chr09: 48570632-48573980 Glycine max
Glyma.09G268100 2.0kb downstream 2.0kb downstream 2000 false Chr09: 48571981-48573980 Glycine max
Glyma.09G268100 5.0kb upstream 5.0kb upstream 6349 true Chr09: 48565632-48571980 Glycine max
Glyma.09G268100 5.0kb upstream 5.0kb upstream 5000 false Chr09: 48565632-48570631 Glycine max
Glyma.09G268100 5.0kb downstream 5.0kb downstream 6349 true Chr09: 48570632-48576980 Glycine max
Glyma.09G268100 5.0kb downstream 5.0kb downstream 5000 false Chr09: 48571981-48576980 Glycine max
Glyma.09G268100 10.0kb upstream 10.0kb upstream 11349 true Chr09: 48560632-48571980 Glycine max
Glyma.09G268100 10.0kb upstream 10.0kb upstream 10000 false Chr09: 48560632-48570631 Glycine max
Glyma.09G268100 10.0kb downstream 10.0kb downstream 11349 true Chr09: 48570632-48581980 Glycine max
Glyma.09G268100 10.0kb downstream 10.0kb downstream 10000 false Chr09: 48571981-48581980 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041483 5273 Angiosperm View MSA
122301042 5265 Fabidae View MSA
124070399 5270 Rosid View MSA
123743735 5271 Pentapetalae View MSA
122787347 5272 Eudicot View MSA
121309855 5274 Embryophyte View MSA
123347500 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.94132 0.0 6.82221    
cufflinks 18.6604 0.0 50.4779   High
cufflinks 2.62279 0.0 8.88315    
cufflinks 5.09961 0.0 15.875    
cufflinks 4.20891 0.0 13.5667    
cufflinks 2.47073 0.0 8.48336    
cufflinks 2.54127 0.0 8.71019    
cufflinks 10.0823 0.0 28.6683   High
cufflinks 1.98024 0.0 6.93396    
cufflinks 17.334     High High
cufflinks 7.034     High  
cufflinks 6.471        
cufflinks 1.059       Low
cufflinks 1.191       Low
cufflinks 1.87       Low
cufflinks 11.792     High  
cufflinks 8.824     High  
cufflinks 14.317     High  
cufflinks 14.01     High  
cufflinks 12.556     High  
cufflinks 3.368        
cufflinks 10.613     High  
cufflinks 6.853        
cufflinks 6.03        
cufflinks 15.275     High  
cufflinks 6.581     High  

0 Strain