Gene : Glyma.09G269300 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR22847//PTHR22847:SF358 - WD40 REPEAT PROTEIN Genomic Order:  2693
Name:  ? Glyma.09G269300 Secondary Identifier:  ? PAC:30483328
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G269300 0.5kb upstream 0.5kb upstream 5701 true Chr09: 48662130-48667830 Glycine max
Glyma.09G269300 0.5kb upstream 0.5kb upstream 500 false Chr09: 48667331-48667830 Glycine max
Glyma.09G269300 0.5kb downstream 0.5kb downstream 5701 true Chr09: 48661630-48667330 Glycine max
Glyma.09G269300 0.5kb downstream 0.5kb downstream 500 false Chr09: 48661630-48662129 Glycine max
Glyma.09G269300 1.0kb upstream 1.0kb upstream 6201 true Chr09: 48662130-48668330 Glycine max
Glyma.09G269300 1.0kb upstream 1.0kb upstream 1000 false Chr09: 48667331-48668330 Glycine max
Glyma.09G269300 1.0kb downstream 1.0kb downstream 6201 true Chr09: 48661130-48667330 Glycine max
Glyma.09G269300 1.0kb downstream 1.0kb downstream 1000 false Chr09: 48661130-48662129 Glycine max
Glyma.09G269300 2.0kb upstream 2.0kb upstream 7201 true Chr09: 48662130-48669330 Glycine max
Glyma.09G269300 2.0kb upstream 2.0kb upstream 2000 false Chr09: 48667331-48669330 Glycine max
Glyma.09G269300 2.0kb downstream 2.0kb downstream 7201 true Chr09: 48660130-48667330 Glycine max
Glyma.09G269300 2.0kb downstream 2.0kb downstream 2000 false Chr09: 48660130-48662129 Glycine max
Glyma.09G269300 5.0kb upstream 5.0kb upstream 10201 true Chr09: 48662130-48672330 Glycine max
Glyma.09G269300 5.0kb upstream 5.0kb upstream 5000 false Chr09: 48667331-48672330 Glycine max
Glyma.09G269300 5.0kb downstream 5.0kb downstream 10201 true Chr09: 48657130-48667330 Glycine max
Glyma.09G269300 5.0kb downstream 5.0kb downstream 5000 false Chr09: 48657130-48662129 Glycine max
Glyma.09G269300 10.0kb upstream 10.0kb upstream 15201 true Chr09: 48662130-48677330 Glycine max
Glyma.09G269300 10.0kb upstream 10.0kb upstream 10000 false Chr09: 48667331-48677330 Glycine max
Glyma.09G269300 10.0kb downstream 10.0kb downstream 15201 true Chr09: 48652130-48667330 Glycine max
Glyma.09G269300 10.0kb downstream 10.0kb downstream 10000 false Chr09: 48652130-48662129 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307428 5265 Fabidae View MSA
124067221 5270 Rosid View MSA
123739645 5271 Pentapetalae View MSA
122792719 5272 Eudicot View MSA
122047366 5273 Angiosperm View MSA
121345194 5274 Embryophyte View MSA
123425476 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.58906 0.0 26.1597    
cufflinks 13.3127 0.0 35.7205    
cufflinks 7.64902 0.0 21.2271   Low
cufflinks 17.9634 0.0 47.926    
cufflinks 20.0991 0.0 53.6409 High  
cufflinks 12.8009 0.0 34.3835    
cufflinks 43.24 0.0 119.834 High High
cufflinks 17.5003 0.0 46.6951    
cufflinks 15.4762 0.0 41.3534    
cufflinks 5.124        
cufflinks 1.84       Low
cufflinks 3.179        
cufflinks 7.384     High High
cufflinks 10.15     High High
cufflinks 4.561        
cufflinks 2.474        
cufflinks 2.815        
cufflinks 3.872        
cufflinks 4.297        
cufflinks 1.718       Low
cufflinks 3.23        
cufflinks 2.201        
cufflinks 2.72        
cufflinks 2.123        
cufflinks 2.093        
cufflinks 3.375        

0 Strain