Gene : Glyma.09G272700 G. max Wm82.a2.v1
Defline:  (1 of 2) 2.5.1.39 - 4-hydroxybenzoate polyprenyltransferase / 4-hydroxybenzoate nonaprenyltransferase Genomic Order:  2727
Name:  ? Glyma.09G272700 Secondary Identifier:  ? PAC:30485319
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-5871 Glycine max pathologic  
Gmax PWY-5872 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G272700 0.5kb upstream 0.5kb upstream 5217 true Chr09: 48904136-48909352 Glycine max
Glyma.09G272700 0.5kb upstream 0.5kb upstream 500 false Chr09: 48908853-48909352 Glycine max
Glyma.09G272700 0.5kb downstream 0.5kb downstream 5217 true Chr09: 48903636-48908852 Glycine max
Glyma.09G272700 0.5kb downstream 0.5kb downstream 500 false Chr09: 48903636-48904135 Glycine max
Glyma.09G272700 1.0kb upstream 1.0kb upstream 5717 true Chr09: 48904136-48909852 Glycine max
Glyma.09G272700 1.0kb upstream 1.0kb upstream 1000 false Chr09: 48908853-48909852 Glycine max
Glyma.09G272700 1.0kb downstream 1.0kb downstream 5717 true Chr09: 48903136-48908852 Glycine max
Glyma.09G272700 1.0kb downstream 1.0kb downstream 1000 false Chr09: 48903136-48904135 Glycine max
Glyma.09G272700 2.0kb upstream 2.0kb upstream 6717 true Chr09: 48904136-48910852 Glycine max
Glyma.09G272700 2.0kb upstream 2.0kb upstream 2000 false Chr09: 48908853-48910852 Glycine max
Glyma.09G272700 2.0kb downstream 2.0kb downstream 6717 true Chr09: 48902136-48908852 Glycine max
Glyma.09G272700 2.0kb downstream 2.0kb downstream 2000 false Chr09: 48902136-48904135 Glycine max
Glyma.09G272700 5.0kb upstream 5.0kb upstream 9717 true Chr09: 48904136-48913852 Glycine max
Glyma.09G272700 5.0kb upstream 5.0kb upstream 5000 false Chr09: 48908853-48913852 Glycine max
Glyma.09G272700 5.0kb downstream 5.0kb downstream 9717 true Chr09: 48899136-48908852 Glycine max
Glyma.09G272700 5.0kb downstream 5.0kb downstream 5000 false Chr09: 48899136-48904135 Glycine max
Glyma.09G272700 10.0kb upstream 10.0kb upstream 14717 true Chr09: 48904136-48918852 Glycine max
Glyma.09G272700 10.0kb upstream 10.0kb upstream 10000 false Chr09: 48908853-48918852 Glycine max
Glyma.09G272700 10.0kb downstream 10.0kb downstream 14717 true Chr09: 48894136-48908852 Glycine max
Glyma.09G272700 10.0kb downstream 10.0kb downstream 10000 false Chr09: 48894136-48904135 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305229 5265 Fabidae View MSA
124066892 5270 Rosid View MSA
123737843 5271 Pentapetalae View MSA
122788354 5272 Eudicot View MSA
122042592 5273 Angiosperm View MSA
121344514 5274 Embryophyte View MSA
123428392 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.159385 0.0 0.63442 Low Low
cufflinks 0.609381 0.0 2.29596   High
cufflinks 0.169664 0.0 0.673334 Low  
cufflinks 0.416866 0.0 1.59739    
cufflinks 0.347681 0.0 1.3437    
cufflinks 0.125548 0.0 0.504007 Low Low
cufflinks 0.617792 0.0 2.32787   High
cufflinks 0.261403 0.0 1.02066    
cufflinks 0.375413 0.0 1.44399    
cufflinks 0.133        
cufflinks 0.021     Low Low
cufflinks 0.283        
cufflinks 0.284        
cufflinks 0.301        
cufflinks 0.104        
cufflinks 0.247        
cufflinks 0.053     Low  
cufflinks 0.354        
cufflinks 0.439        
cufflinks 0.395        
cufflinks 0.056     Low  
cufflinks 0.387        
cufflinks 0.483       High
cufflinks 0.02     Low Low
cufflinks 0.39        
cufflinks 0.029     Low Low

0 Strain