Gene : Glyma.09G261100 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11953:SF1 - EXOSOME COMPLEX COMPONENT RRP46 Genomic Order:  2611
Name:  ? Glyma.09G261100 Secondary Identifier:  ? PAC:30483819
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G261100 0.5kb upstream 0.5kb upstream 4818 true Chr09: 47916699-47921516 Glycine max
Glyma.09G261100 0.5kb upstream 0.5kb upstream 500 false Chr09: 47921017-47921516 Glycine max
Glyma.09G261100 0.5kb downstream 0.5kb downstream 4818 true Chr09: 47916199-47921016 Glycine max
Glyma.09G261100 0.5kb downstream 0.5kb downstream 500 false Chr09: 47916199-47916698 Glycine max
Glyma.09G261100 1.0kb upstream 1.0kb upstream 5318 true Chr09: 47916699-47922016 Glycine max
Glyma.09G261100 1.0kb upstream 1.0kb upstream 1000 false Chr09: 47921017-47922016 Glycine max
Glyma.09G261100 1.0kb downstream 1.0kb downstream 5318 true Chr09: 47915699-47921016 Glycine max
Glyma.09G261100 1.0kb downstream 1.0kb downstream 1000 false Chr09: 47915699-47916698 Glycine max
Glyma.09G261100 2.0kb upstream 2.0kb upstream 6318 true Chr09: 47916699-47923016 Glycine max
Glyma.09G261100 2.0kb upstream 2.0kb upstream 2000 false Chr09: 47921017-47923016 Glycine max
Glyma.09G261100 2.0kb downstream 2.0kb downstream 6318 true Chr09: 47914699-47921016 Glycine max
Glyma.09G261100 2.0kb downstream 2.0kb downstream 2000 false Chr09: 47914699-47916698 Glycine max
Glyma.09G261100 5.0kb upstream 5.0kb upstream 9318 true Chr09: 47916699-47926016 Glycine max
Glyma.09G261100 5.0kb upstream 5.0kb upstream 5000 false Chr09: 47921017-47926016 Glycine max
Glyma.09G261100 5.0kb downstream 5.0kb downstream 9318 true Chr09: 47911699-47921016 Glycine max
Glyma.09G261100 5.0kb downstream 5.0kb downstream 5000 false Chr09: 47911699-47916698 Glycine max
Glyma.09G261100 10.0kb upstream 10.0kb upstream 14318 true Chr09: 47916699-47931016 Glycine max
Glyma.09G261100 10.0kb upstream 10.0kb upstream 10000 false Chr09: 47921017-47931016 Glycine max
Glyma.09G261100 10.0kb downstream 10.0kb downstream 14318 true Chr09: 47906699-47921016 Glycine max
Glyma.09G261100 10.0kb downstream 10.0kb downstream 10000 false Chr09: 47906699-47916698 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308372 5265 Fabidae View MSA
124063163 5270 Rosid View MSA
123740282 5271 Pentapetalae View MSA
122793891 5272 Eudicot View MSA
122042132 5273 Angiosperm View MSA
121346708 5274 Embryophyte View MSA
123426253 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.24296 0.0 20.505    
cufflinks 6.83913 0.0 34.7655    
cufflinks 3.06057 0.0 17.7884   Low
cufflinks 3.27342 0.0 20.966   Low
cufflinks 7.05078 0.0 35.5452   High
cufflinks 4.15994 0.0 17.4621    
cufflinks 5.15053 0.0 23.967    
cufflinks 7.58143 0.0 26.5678   High
cufflinks 4.99555 0.0 27.7269    
cufflinks 0.343        
cufflinks 0.099       Low
cufflinks 0.195        
cufflinks 0.425       High
cufflinks 0.579       High
cufflinks 0.16        
cufflinks 0.298        
cufflinks 0.139       Low
cufflinks 0.23        
cufflinks 0.374        
cufflinks 0.225        
cufflinks 0.192        
cufflinks 0.224        
cufflinks 0.407       High
cufflinks 0.125       Low
cufflinks 0.251        
cufflinks 0.168        

0 Strain