Gene : Glyma.10G020400 G. max Wm82.a2.v1
Defline:  (1 of 37) PF02892//PF04937//PF05699 - BED zinc finger (zf-BED) // Protein of unknown function (DUF 659) (DUF659) // hAT family C-terminal dimerisation region (Dimer_Tnp_hAT) Genomic Order:  204
Name:  ? Glyma.10G020400 Secondary Identifier:  ? PAC:30477685
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G020400 0.5kb upstream 0.5kb upstream 3898 true Chr10: 1770214-1774111 Glycine max
Glyma.10G020400 0.5kb upstream 0.5kb upstream 500 false Chr10: 1770214-1770713 Glycine max
Glyma.10G020400 0.5kb downstream 0.5kb downstream 3898 true Chr10: 1770714-1774611 Glycine max
Glyma.10G020400 0.5kb downstream 0.5kb downstream 500 false Chr10: 1774112-1774611 Glycine max
Glyma.10G020400 1.0kb upstream 1.0kb upstream 4398 true Chr10: 1769714-1774111 Glycine max
Glyma.10G020400 1.0kb upstream 1.0kb upstream 1000 false Chr10: 1769714-1770713 Glycine max
Glyma.10G020400 1.0kb downstream 1.0kb downstream 4398 true Chr10: 1770714-1775111 Glycine max
Glyma.10G020400 1.0kb downstream 1.0kb downstream 1000 false Chr10: 1774112-1775111 Glycine max
Glyma.10G020400 2.0kb upstream 2.0kb upstream 5398 true Chr10: 1768714-1774111 Glycine max
Glyma.10G020400 2.0kb upstream 2.0kb upstream 2000 false Chr10: 1768714-1770713 Glycine max
Glyma.10G020400 2.0kb downstream 2.0kb downstream 5398 true Chr10: 1770714-1776111 Glycine max
Glyma.10G020400 2.0kb downstream 2.0kb downstream 2000 false Chr10: 1774112-1776111 Glycine max
Glyma.10G020400 5.0kb upstream 5.0kb upstream 8398 true Chr10: 1765714-1774111 Glycine max
Glyma.10G020400 5.0kb upstream 5.0kb upstream 5000 false Chr10: 1765714-1770713 Glycine max
Glyma.10G020400 5.0kb downstream 5.0kb downstream 8398 true Chr10: 1770714-1779111 Glycine max
Glyma.10G020400 5.0kb downstream 5.0kb downstream 5000 false Chr10: 1774112-1779111 Glycine max
Glyma.10G020400 10.0kb upstream 10.0kb upstream 13398 true Chr10: 1760714-1774111 Glycine max
Glyma.10G020400 10.0kb upstream 10.0kb upstream 10000 false Chr10: 1760714-1770713 Glycine max
Glyma.10G020400 10.0kb downstream 10.0kb downstream 13398 true Chr10: 1770714-1784111 Glycine max
Glyma.10G020400 10.0kb downstream 10.0kb downstream 10000 false Chr10: 1774112-1784111 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313005 5265 Fabidae View MSA
124071231 5270 Rosid View MSA
123752967 5271 Pentapetalae View MSA
122794205 5272 Eudicot View MSA
122051703 5273 Angiosperm View MSA
121347820 5274 Embryophyte View MSA
123428458 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.104564 0.0 1.25681 Low High
cufflinks 0.0375222 0.0 0.69187 Low  
cufflinks 0.0938409 0.0 1.24752 Low High
cufflinks 0.0721965 0.0 1.14726 Low  
cufflinks 0.0286211 0.0 0.597118 Low Low
cufflinks 0.0492191 0.0 0.792509 Low  
cufflinks 0.0830612 0.0 1.2801 Low  
cufflinks 0.036109 0.0 0.734274 Low Low
cufflinks 0.0635574 0.0 0.948921 Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.005     Low  
cufflinks 0.005     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.004     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.005     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.005     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.007     Low High
cufflinks 0.008     Low High
cufflinks 0.005     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain