Gene : Glyma.10G022600 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR19924:SF26 - U3 SMALL NUCLEOLAR RNA-ASSOCIATED PROTEIN 15 HOMOLOG Genomic Order:  226
Name:  ? Glyma.10G022600 Secondary Identifier:  ? PAC:30476390
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G022600 0.5kb upstream 0.5kb upstream 7087 true Chr10: 1957124-1964210 Glycine max
Glyma.10G022600 0.5kb upstream 0.5kb upstream 500 false Chr10: 1963711-1964210 Glycine max
Glyma.10G022600 0.5kb downstream 0.5kb downstream 7087 true Chr10: 1956624-1963710 Glycine max
Glyma.10G022600 0.5kb downstream 0.5kb downstream 500 false Chr10: 1956624-1957123 Glycine max
Glyma.10G022600 1.0kb upstream 1.0kb upstream 7587 true Chr10: 1957124-1964710 Glycine max
Glyma.10G022600 1.0kb upstream 1.0kb upstream 1000 false Chr10: 1963711-1964710 Glycine max
Glyma.10G022600 1.0kb downstream 1.0kb downstream 7587 true Chr10: 1956124-1963710 Glycine max
Glyma.10G022600 1.0kb downstream 1.0kb downstream 1000 false Chr10: 1956124-1957123 Glycine max
Glyma.10G022600 2.0kb upstream 2.0kb upstream 8587 true Chr10: 1957124-1965710 Glycine max
Glyma.10G022600 2.0kb upstream 2.0kb upstream 2000 false Chr10: 1963711-1965710 Glycine max
Glyma.10G022600 2.0kb downstream 2.0kb downstream 8587 true Chr10: 1955124-1963710 Glycine max
Glyma.10G022600 2.0kb downstream 2.0kb downstream 2000 false Chr10: 1955124-1957123 Glycine max
Glyma.10G022600 5.0kb upstream 5.0kb upstream 11587 true Chr10: 1957124-1968710 Glycine max
Glyma.10G022600 5.0kb upstream 5.0kb upstream 5000 false Chr10: 1963711-1968710 Glycine max
Glyma.10G022600 5.0kb downstream 5.0kb downstream 11587 true Chr10: 1952124-1963710 Glycine max
Glyma.10G022600 5.0kb downstream 5.0kb downstream 5000 false Chr10: 1952124-1957123 Glycine max
Glyma.10G022600 10.0kb upstream 10.0kb upstream 16587 true Chr10: 1957124-1973710 Glycine max
Glyma.10G022600 10.0kb upstream 10.0kb upstream 10000 false Chr10: 1963711-1973710 Glycine max
Glyma.10G022600 10.0kb downstream 10.0kb downstream 16587 true Chr10: 1947124-1963710 Glycine max
Glyma.10G022600 10.0kb downstream 10.0kb downstream 10000 false Chr10: 1947124-1957123 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041129 5273 Angiosperm View MSA
122305138 5265 Fabidae View MSA
124066406 5270 Rosid View MSA
123738501 5271 Pentapetalae View MSA
122791518 5272 Eudicot View MSA
121344745 5274 Embryophyte View MSA
123424806 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.24407 0.0 16.7312   High
cufflinks 3.0919 0.0 8.68141    
cufflinks 1.92689 0.0 5.72036   Low
cufflinks 2.90149 0.0 8.1956    
cufflinks 5.34393 0.0 14.3957   High
cufflinks 1.75911 0.0 5.28046   Low
cufflinks 5.53914 0.0 14.9059   High
cufflinks 2.33139 0.0 6.75269    
cufflinks 2.88559 0.0 8.14827    
cufflinks 0.979        
cufflinks 0.236       Low
cufflinks 2.62       High
cufflinks 2.19        
cufflinks 3.546       High
cufflinks 0.596        
cufflinks 1.265        
cufflinks 0.866        
cufflinks 2.524       High
cufflinks 2.472       High
cufflinks 1.036        
cufflinks 0.307       Low
cufflinks 1.14        
cufflinks 2.152        
cufflinks 0.284       Low
cufflinks 1.261        
cufflinks 0.548        

0 Strain