Gene : Glyma.10G023800 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR16019:SF7 - BSD DOMAIN-CONTAINING PROTEIN Genomic Order:  238
Name:  ? Glyma.10G023800 Secondary Identifier:  ? PAC:30477579
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G023800 0.5kb upstream 0.5kb upstream 2252 true Chr10: 2086534-2088785 Glycine max
Glyma.10G023800 0.5kb upstream 0.5kb upstream 500 false Chr10: 2086534-2087033 Glycine max
Glyma.10G023800 0.5kb downstream 0.5kb downstream 2252 true Chr10: 2087034-2089285 Glycine max
Glyma.10G023800 0.5kb downstream 0.5kb downstream 500 false Chr10: 2088786-2089285 Glycine max
Glyma.10G023800 1.0kb upstream 1.0kb upstream 2752 true Chr10: 2086034-2088785 Glycine max
Glyma.10G023800 1.0kb upstream 1.0kb upstream 1000 false Chr10: 2086034-2087033 Glycine max
Glyma.10G023800 1.0kb downstream 1.0kb downstream 2752 true Chr10: 2087034-2089785 Glycine max
Glyma.10G023800 1.0kb downstream 1.0kb downstream 1000 false Chr10: 2088786-2089785 Glycine max
Glyma.10G023800 2.0kb upstream 2.0kb upstream 3752 true Chr10: 2085034-2088785 Glycine max
Glyma.10G023800 2.0kb upstream 2.0kb upstream 2000 false Chr10: 2085034-2087033 Glycine max
Glyma.10G023800 2.0kb downstream 2.0kb downstream 3752 true Chr10: 2087034-2090785 Glycine max
Glyma.10G023800 2.0kb downstream 2.0kb downstream 2000 false Chr10: 2088786-2090785 Glycine max
Glyma.10G023800 5.0kb upstream 5.0kb upstream 6752 true Chr10: 2082034-2088785 Glycine max
Glyma.10G023800 5.0kb upstream 5.0kb upstream 5000 false Chr10: 2082034-2087033 Glycine max
Glyma.10G023800 5.0kb downstream 5.0kb downstream 6752 true Chr10: 2087034-2093785 Glycine max
Glyma.10G023800 5.0kb downstream 5.0kb downstream 5000 false Chr10: 2088786-2093785 Glycine max
Glyma.10G023800 10.0kb upstream 10.0kb upstream 11752 true Chr10: 2077034-2088785 Glycine max
Glyma.10G023800 10.0kb upstream 10.0kb upstream 10000 false Chr10: 2077034-2087033 Glycine max
Glyma.10G023800 10.0kb downstream 10.0kb downstream 11752 true Chr10: 2087034-2098785 Glycine max
Glyma.10G023800 10.0kb downstream 10.0kb downstream 10000 false Chr10: 2088786-2098785 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301905 5265 Fabidae View MSA
124071131 5270 Rosid View MSA
123740161 5271 Pentapetalae View MSA
122791095 5272 Eudicot View MSA
122047719 5273 Angiosperm View MSA
121347355 5274 Embryophyte View MSA
123428249 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.4999 0.0 30.7949    
cufflinks 16.6278 0.0 44.3733    
cufflinks 12.3483 0.0 33.0201    
cufflinks 16.7475 0.0 44.702    
cufflinks 12.1507 0.0 32.496    
cufflinks 15.2959 0.0 40.8076    
cufflinks 9.86847 0.0 26.5844   Low
cufflinks 20.1685 0.0 54.018   High
cufflinks 9.99447 0.0 26.9154   Low
cufflinks 23.539     High  
cufflinks 3.121       Low
cufflinks 16.949     High  
cufflinks 16.545     High  
cufflinks 18.342     High  
cufflinks 3.87       Low
cufflinks 19.053     High  
cufflinks 4.859       Low
cufflinks 18.008     High  
cufflinks 24.515     High High
cufflinks 21.118     High  
cufflinks 4.534       Low
cufflinks 20.526     High  
cufflinks 16.212     High  
cufflinks 6.232     High  
cufflinks 20.065     High  
cufflinks 5.404       Low

0 Strain