Gene : Glyma.10G024300 G. max Wm82.a2.v1
Defline:  (1 of 24) KOG1987 - Speckle-type POZ protein SPOP and related proteins with TRAF, MATH and BTB/POZ domains Genomic Order:  243
Name:  ? Glyma.10G024300 Secondary Identifier:  ? PAC:30477864
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G024300 0.5kb upstream 0.5kb upstream 4888 true Chr10: 2135554-2140441 Glycine max
Glyma.10G024300 0.5kb upstream 0.5kb upstream 500 false Chr10: 2135554-2136053 Glycine max
Glyma.10G024300 0.5kb downstream 0.5kb downstream 4888 true Chr10: 2136054-2140941 Glycine max
Glyma.10G024300 0.5kb downstream 0.5kb downstream 500 false Chr10: 2140442-2140941 Glycine max
Glyma.10G024300 1.0kb upstream 1.0kb upstream 5388 true Chr10: 2135054-2140441 Glycine max
Glyma.10G024300 1.0kb upstream 1.0kb upstream 1000 false Chr10: 2135054-2136053 Glycine max
Glyma.10G024300 1.0kb downstream 1.0kb downstream 5388 true Chr10: 2136054-2141441 Glycine max
Glyma.10G024300 1.0kb downstream 1.0kb downstream 1000 false Chr10: 2140442-2141441 Glycine max
Glyma.10G024300 2.0kb upstream 2.0kb upstream 6388 true Chr10: 2134054-2140441 Glycine max
Glyma.10G024300 2.0kb upstream 2.0kb upstream 2000 false Chr10: 2134054-2136053 Glycine max
Glyma.10G024300 2.0kb downstream 2.0kb downstream 6388 true Chr10: 2136054-2142441 Glycine max
Glyma.10G024300 2.0kb downstream 2.0kb downstream 2000 false Chr10: 2140442-2142441 Glycine max
Glyma.10G024300 5.0kb upstream 5.0kb upstream 9388 true Chr10: 2131054-2140441 Glycine max
Glyma.10G024300 5.0kb upstream 5.0kb upstream 5000 false Chr10: 2131054-2136053 Glycine max
Glyma.10G024300 5.0kb downstream 5.0kb downstream 9388 true Chr10: 2136054-2145441 Glycine max
Glyma.10G024300 5.0kb downstream 5.0kb downstream 5000 false Chr10: 2140442-2145441 Glycine max
Glyma.10G024300 10.0kb upstream 10.0kb upstream 14388 true Chr10: 2126054-2140441 Glycine max
Glyma.10G024300 10.0kb upstream 10.0kb upstream 10000 false Chr10: 2126054-2136053 Glycine max
Glyma.10G024300 10.0kb downstream 10.0kb downstream 14388 true Chr10: 2136054-2150441 Glycine max
Glyma.10G024300 10.0kb downstream 10.0kb downstream 10000 false Chr10: 2140442-2150441 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040960 5273 Angiosperm View MSA
122309857 5265 Fabidae View MSA
124064148 5270 Rosid View MSA
123743633 5271 Pentapetalae View MSA
122791318 5272 Eudicot View MSA
121348457 5274 Embryophyte View MSA
123428082 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.3633 0.0 94.8301   High
cufflinks 12.7494 0.0 54.2332   Low
cufflinks 18.167 0.0 83.6829    
cufflinks 12.507 0.0 53.2872   Low
cufflinks 16.5523 0.0 78.4936    
cufflinks 15.5278 0.0 71.7046    
cufflinks 17.6379 0.0 85.7464    
cufflinks 13.3827 0.0 54.6593    
cufflinks 13.5428 0.0 63.4252    
cufflinks 3.209        
cufflinks 17.098     High High
cufflinks 2.669        
cufflinks 2.231        
cufflinks 2.076       Low
cufflinks 27.878     High High
cufflinks 4.331        
cufflinks 15.856     High High
cufflinks 2.079       Low
cufflinks 2.132       Low
cufflinks 4.266        
cufflinks 16.633     High High
cufflinks 3.952        
cufflinks 2.55        
cufflinks 10.777     High  
cufflinks 4.404        
cufflinks 14.446     High High

0 Strain