Gene : Glyma.10G024500 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR12550:SF5 - HUA2-LIKE PROTEIN 2-RELATED Genomic Order:  245
Name:  ? Glyma.10G024500 Secondary Identifier:  ? PAC:30478225
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G024500 0.5kb upstream 0.5kb upstream 13872 true Chr10: 2149849-2163720 Glycine max
Glyma.10G024500 0.5kb upstream 0.5kb upstream 500 false Chr10: 2149849-2150348 Glycine max
Glyma.10G024500 0.5kb downstream 0.5kb downstream 13872 true Chr10: 2150349-2164220 Glycine max
Glyma.10G024500 0.5kb downstream 0.5kb downstream 500 false Chr10: 2163721-2164220 Glycine max
Glyma.10G024500 1.0kb upstream 1.0kb upstream 14372 true Chr10: 2149349-2163720 Glycine max
Glyma.10G024500 1.0kb upstream 1.0kb upstream 1000 false Chr10: 2149349-2150348 Glycine max
Glyma.10G024500 1.0kb downstream 1.0kb downstream 14372 true Chr10: 2150349-2164720 Glycine max
Glyma.10G024500 1.0kb downstream 1.0kb downstream 1000 false Chr10: 2163721-2164720 Glycine max
Glyma.10G024500 2.0kb upstream 2.0kb upstream 15372 true Chr10: 2148349-2163720 Glycine max
Glyma.10G024500 2.0kb upstream 2.0kb upstream 2000 false Chr10: 2148349-2150348 Glycine max
Glyma.10G024500 2.0kb downstream 2.0kb downstream 15372 true Chr10: 2150349-2165720 Glycine max
Glyma.10G024500 2.0kb downstream 2.0kb downstream 2000 false Chr10: 2163721-2165720 Glycine max
Glyma.10G024500 5.0kb upstream 5.0kb upstream 18372 true Chr10: 2145349-2163720 Glycine max
Glyma.10G024500 5.0kb upstream 5.0kb upstream 5000 false Chr10: 2145349-2150348 Glycine max
Glyma.10G024500 5.0kb downstream 5.0kb downstream 18372 true Chr10: 2150349-2168720 Glycine max
Glyma.10G024500 5.0kb downstream 5.0kb downstream 5000 false Chr10: 2163721-2168720 Glycine max
Glyma.10G024500 10.0kb upstream 10.0kb upstream 23372 true Chr10: 2140349-2163720 Glycine max
Glyma.10G024500 10.0kb upstream 10.0kb upstream 10000 false Chr10: 2140349-2150348 Glycine max
Glyma.10G024500 10.0kb downstream 10.0kb downstream 23372 true Chr10: 2150349-2173720 Glycine max
Glyma.10G024500 10.0kb downstream 10.0kb downstream 10000 false Chr10: 2163721-2173720 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307172 5265 Fabidae View MSA
124068925 5270 Rosid View MSA
123739923 5271 Pentapetalae View MSA
122787365 5272 Eudicot View MSA
122045981 5273 Angiosperm View MSA
121348471 5274 Embryophyte View MSA
123424079 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.6003 0.0 56.5743    
cufflinks 6.44086 0.0 27.337    
cufflinks 27.1598 0.0 208.447 High High
cufflinks 8.30911 0.0 38.6132    
cufflinks 7.1044 0.0 35.0719    
cufflinks 6.62572 0.0 33.4923    
cufflinks 12.5527 0.0 76.4929    
cufflinks 8.03348 0.0 38.5433    
cufflinks 7.40095 0.0 38.1957    
cufflinks 0.291       Low
cufflinks 0.636        
cufflinks 0.797       High
cufflinks 0.38       Low
cufflinks 0.375       Low
cufflinks 0.657        
cufflinks 0.556        
cufflinks 0.304       Low
cufflinks 0.507        
cufflinks 0.488        
cufflinks 0.6        
cufflinks 0.643        
cufflinks 0.604        
cufflinks 0.547        
cufflinks 0.74       High
cufflinks 0.577        
cufflinks 0.494        

0 Strain