Gene : Glyma.10G011700 G. max Wm82.a2.v1

Defline:  (1 of 2) PTHR36044:SF1 - HEME BINDING PROTEIN Genomic Order:  117
Name:  ? Glyma.10G011700 Secondary Identifier:  ? PAC:30477518

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G011700 0.5kb upstream 0.5kb upstream 9117 true Chr10: 1087766-1096882 Glycine max
Glyma.10G011700 0.5kb upstream 0.5kb upstream 500 false Chr10: 1087766-1088265 Glycine max
Glyma.10G011700 0.5kb downstream 0.5kb downstream 9117 true Chr10: 1088266-1097382 Glycine max
Glyma.10G011700 0.5kb downstream 0.5kb downstream 500 false Chr10: 1096883-1097382 Glycine max
Glyma.10G011700 1.0kb upstream 1.0kb upstream 9617 true Chr10: 1087266-1096882 Glycine max
Glyma.10G011700 1.0kb upstream 1.0kb upstream 1000 false Chr10: 1087266-1088265 Glycine max
Glyma.10G011700 1.0kb downstream 1.0kb downstream 9617 true Chr10: 1088266-1097882 Glycine max
Glyma.10G011700 1.0kb downstream 1.0kb downstream 1000 false Chr10: 1096883-1097882 Glycine max
Glyma.10G011700 2.0kb upstream 2.0kb upstream 10617 true Chr10: 1086266-1096882 Glycine max
Glyma.10G011700 2.0kb upstream 2.0kb upstream 2000 false Chr10: 1086266-1088265 Glycine max
Glyma.10G011700 2.0kb downstream 2.0kb downstream 10617 true Chr10: 1088266-1098882 Glycine max
Glyma.10G011700 2.0kb downstream 2.0kb downstream 2000 false Chr10: 1096883-1098882 Glycine max
Glyma.10G011700 5.0kb upstream 5.0kb upstream 13617 true Chr10: 1083266-1096882 Glycine max
Glyma.10G011700 5.0kb upstream 5.0kb upstream 5000 false Chr10: 1083266-1088265 Glycine max
Glyma.10G011700 5.0kb downstream 5.0kb downstream 13617 true Chr10: 1088266-1101882 Glycine max
Glyma.10G011700 5.0kb downstream 5.0kb downstream 5000 false Chr10: 1096883-1101882 Glycine max
Glyma.10G011700 10.0kb upstream 10.0kb upstream 18617 true Chr10: 1078266-1096882 Glycine max
Glyma.10G011700 10.0kb upstream 10.0kb upstream 10000 false Chr10: 1078266-1088265 Glycine max
Glyma.10G011700 10.0kb downstream 10.0kb downstream 18617 true Chr10: 1088266-1106882 Glycine max
Glyma.10G011700 10.0kb downstream 10.0kb downstream 10000 false Chr10: 1096883-1106882 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041410 5273 Angiosperm View MSA
122300700 5265 Fabidae View MSA
124073122 5270 Rosid View MSA
123745290 5271 Pentapetalae View MSA
122793482 5272 Eudicot View MSA
121347553 5274 Embryophyte View MSA
123380570 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.57997 0.0 5.4921   Low
cufflinks 19.6525 0.0 52.5155   High
cufflinks 4.89456 0.0 14.6824    
cufflinks 8.76632 0.0 24.5362    
cufflinks 12.0198 0.0 32.7567    
cufflinks 5.84986 0.0 17.1361    
cufflinks 1.87898 0.0 6.42472   Low
cufflinks 13.3701 0.0 36.2369    
cufflinks 8.40524 0.0 23.622    
cufflinks 3.885       High
cufflinks 0.299       Low
cufflinks 1.548        
cufflinks 2.729        
cufflinks 3.953       High
cufflinks 0.141       Low
cufflinks 1.688        
cufflinks 1.119        
cufflinks 2.02        
cufflinks 3.583       High
cufflinks 1.296        
cufflinks 0.568        
cufflinks 1.475        
cufflinks 2.385        
cufflinks 0.346       Low
cufflinks 1.18        
cufflinks 0.787        

0 Strain