Gene : Glyma.10G012300 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR10381:SF12 - ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT 5, CHLOROPLASTIC Genomic Order:  123
Name:  ? Glyma.10G012300 Secondary Identifier:  ? PAC:30477378
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G012300 0.5kb upstream 0.5kb upstream 4819 true Chr10: 1126974-1131792 Glycine max
Glyma.10G012300 0.5kb upstream 0.5kb upstream 500 false Chr10: 1126974-1127473 Glycine max
Glyma.10G012300 0.5kb downstream 0.5kb downstream 4819 true Chr10: 1127474-1132292 Glycine max
Glyma.10G012300 0.5kb downstream 0.5kb downstream 500 false Chr10: 1131793-1132292 Glycine max
Glyma.10G012300 1.0kb upstream 1.0kb upstream 5319 true Chr10: 1126474-1131792 Glycine max
Glyma.10G012300 1.0kb upstream 1.0kb upstream 1000 false Chr10: 1126474-1127473 Glycine max
Glyma.10G012300 1.0kb downstream 1.0kb downstream 5319 true Chr10: 1127474-1132792 Glycine max
Glyma.10G012300 1.0kb downstream 1.0kb downstream 1000 false Chr10: 1131793-1132792 Glycine max
Glyma.10G012300 2.0kb upstream 2.0kb upstream 6319 true Chr10: 1125474-1131792 Glycine max
Glyma.10G012300 2.0kb upstream 2.0kb upstream 2000 false Chr10: 1125474-1127473 Glycine max
Glyma.10G012300 2.0kb downstream 2.0kb downstream 6319 true Chr10: 1127474-1133792 Glycine max
Glyma.10G012300 2.0kb downstream 2.0kb downstream 2000 false Chr10: 1131793-1133792 Glycine max
Glyma.10G012300 5.0kb upstream 5.0kb upstream 9319 true Chr10: 1122474-1131792 Glycine max
Glyma.10G012300 5.0kb upstream 5.0kb upstream 5000 false Chr10: 1122474-1127473 Glycine max
Glyma.10G012300 5.0kb downstream 5.0kb downstream 9319 true Chr10: 1127474-1136792 Glycine max
Glyma.10G012300 5.0kb downstream 5.0kb downstream 5000 false Chr10: 1131793-1136792 Glycine max
Glyma.10G012300 10.0kb upstream 10.0kb upstream 14319 true Chr10: 1117474-1131792 Glycine max
Glyma.10G012300 10.0kb upstream 10.0kb upstream 10000 false Chr10: 1117474-1127473 Glycine max
Glyma.10G012300 10.0kb downstream 10.0kb downstream 14319 true Chr10: 1127474-1141792 Glycine max
Glyma.10G012300 10.0kb downstream 10.0kb downstream 10000 false Chr10: 1131793-1141792 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308927 5265 Fabidae View MSA
124067501 5270 Rosid View MSA
123746339 5271 Pentapetalae View MSA
122771871 5272 Eudicot View MSA
122043333 5273 Angiosperm View MSA
121344238 5274 Embryophyte View MSA
123424888 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 66.1306 0.0 184.478 High High
cufflinks 24.9034 0.0 66.4504 High  
cufflinks 17.5169 0.0 47.0924    
cufflinks 18.5266 0.0 49.7239    
cufflinks 15.0646 0.0 40.8387    
cufflinks 10.3459 0.0 28.8688   Low
cufflinks 17.3026 0.0 46.602    
cufflinks 15.5409 0.0 42.0454    
cufflinks 11.4119 0.0 31.5322    
cufflinks 4.339        
cufflinks 0.314       Low
cufflinks 4.847        
cufflinks 3.764        
cufflinks 3.66        
cufflinks 0.814       Low
cufflinks 14.116     High High
cufflinks 1.823        
cufflinks 4.801        
cufflinks 6.406        
cufflinks 13.604     High High
cufflinks 0.564       Low
cufflinks 12.812     High High
cufflinks 14.387     High High
cufflinks 0.625       Low
cufflinks 13.658     High High
cufflinks 1.257        

0 Strain