Gene : Glyma.10G012800 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR34372:SF2 - CYTOCHROME C OXIDASE SUBUNIT 5C-2-RELATED Genomic Order:  128
Name:  ? Glyma.10G012800 Secondary Identifier:  ? PAC:30477131
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G012800 0.5kb upstream 0.5kb upstream 2122 true Chr10: 1163516-1165637 Glycine max
Glyma.10G012800 0.5kb upstream 0.5kb upstream 500 false Chr10: 1163516-1164015 Glycine max
Glyma.10G012800 0.5kb downstream 0.5kb downstream 2122 true Chr10: 1164016-1166137 Glycine max
Glyma.10G012800 0.5kb downstream 0.5kb downstream 500 false Chr10: 1165638-1166137 Glycine max
Glyma.10G012800 1.0kb upstream 1.0kb upstream 2622 true Chr10: 1163016-1165637 Glycine max
Glyma.10G012800 1.0kb upstream 1.0kb upstream 1000 false Chr10: 1163016-1164015 Glycine max
Glyma.10G012800 1.0kb downstream 1.0kb downstream 2622 true Chr10: 1164016-1166637 Glycine max
Glyma.10G012800 1.0kb downstream 1.0kb downstream 1000 false Chr10: 1165638-1166637 Glycine max
Glyma.10G012800 2.0kb upstream 2.0kb upstream 3622 true Chr10: 1162016-1165637 Glycine max
Glyma.10G012800 2.0kb upstream 2.0kb upstream 2000 false Chr10: 1162016-1164015 Glycine max
Glyma.10G012800 2.0kb downstream 2.0kb downstream 3622 true Chr10: 1164016-1167637 Glycine max
Glyma.10G012800 2.0kb downstream 2.0kb downstream 2000 false Chr10: 1165638-1167637 Glycine max
Glyma.10G012800 5.0kb upstream 5.0kb upstream 6622 true Chr10: 1159016-1165637 Glycine max
Glyma.10G012800 5.0kb upstream 5.0kb upstream 5000 false Chr10: 1159016-1164015 Glycine max
Glyma.10G012800 5.0kb downstream 5.0kb downstream 6622 true Chr10: 1164016-1170637 Glycine max
Glyma.10G012800 5.0kb downstream 5.0kb downstream 5000 false Chr10: 1165638-1170637 Glycine max
Glyma.10G012800 10.0kb upstream 10.0kb upstream 11622 true Chr10: 1154016-1165637 Glycine max
Glyma.10G012800 10.0kb upstream 10.0kb upstream 10000 false Chr10: 1154016-1164015 Glycine max
Glyma.10G012800 10.0kb downstream 10.0kb downstream 11622 true Chr10: 1164016-1175637 Glycine max
Glyma.10G012800 10.0kb downstream 10.0kb downstream 10000 false Chr10: 1165638-1175637 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305772 5265 Fabidae View MSA
124062705 5270 Rosid View MSA
123751870 5271 Pentapetalae View MSA
122793093 5272 Eudicot View MSA
122049821 5273 Angiosperm View MSA
121349750 5274 Embryophyte View MSA
123428539 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 97.9149 0.0 265.326 High  
cufflinks 129.758 0.0 358.679 High  
cufflinks 117.543 0.0 323.081 High  
cufflinks 56.9846 0.0 152.029 High Low
cufflinks 238.856 0.0 714.181 High  
cufflinks 374.892 0.0 1214.9 High High
cufflinks 90.7157 0.0 244.907 High  
cufflinks 158.338 0.0 447.343 High  
cufflinks 293.908 0.0 908.942 High High
cufflinks 76.007     High High
cufflinks 27.464     High Low
cufflinks 35.339     High  
cufflinks 83.32     High High
cufflinks 88.595     High High
cufflinks 72.651     High High
cufflinks 44.177     High  
cufflinks 41.698     High  
cufflinks 56.681     High  
cufflinks 45.881     High  
cufflinks 39.645     High  
cufflinks 36.451     High  
cufflinks 40.853     High  
cufflinks 40.006     High  
cufflinks 32.476     High Low
cufflinks 46.808     High  
cufflinks 45.582     High  

0 Strain