Gene : Glyma.10G015100 G. max Wm82.a2.v1
Defline:  (1 of 67) PF05553 - Cotton fibre expressed protein (DUF761) Genomic Order:  151
Name:  ? Glyma.10G015100 Secondary Identifier:  ? PAC:30477834
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G015100 0.5kb upstream 0.5kb upstream 1221 true Chr10: 1338589-1339809 Glycine max
Glyma.10G015100 0.5kb upstream 0.5kb upstream 500 false Chr10: 1338589-1339088 Glycine max
Glyma.10G015100 0.5kb downstream 0.5kb downstream 1221 true Chr10: 1339089-1340309 Glycine max
Glyma.10G015100 0.5kb downstream 0.5kb downstream 500 false Chr10: 1339810-1340309 Glycine max
Glyma.10G015100 1.0kb upstream 1.0kb upstream 1721 true Chr10: 1338089-1339809 Glycine max
Glyma.10G015100 1.0kb upstream 1.0kb upstream 1000 false Chr10: 1338089-1339088 Glycine max
Glyma.10G015100 1.0kb downstream 1.0kb downstream 1721 true Chr10: 1339089-1340809 Glycine max
Glyma.10G015100 1.0kb downstream 1.0kb downstream 1000 false Chr10: 1339810-1340809 Glycine max
Glyma.10G015100 2.0kb upstream 2.0kb upstream 2721 true Chr10: 1337089-1339809 Glycine max
Glyma.10G015100 2.0kb upstream 2.0kb upstream 2000 false Chr10: 1337089-1339088 Glycine max
Glyma.10G015100 2.0kb downstream 2.0kb downstream 2721 true Chr10: 1339089-1341809 Glycine max
Glyma.10G015100 2.0kb downstream 2.0kb downstream 2000 false Chr10: 1339810-1341809 Glycine max
Glyma.10G015100 5.0kb upstream 5.0kb upstream 5721 true Chr10: 1334089-1339809 Glycine max
Glyma.10G015100 5.0kb upstream 5.0kb upstream 5000 false Chr10: 1334089-1339088 Glycine max
Glyma.10G015100 5.0kb downstream 5.0kb downstream 5721 true Chr10: 1339089-1344809 Glycine max
Glyma.10G015100 5.0kb downstream 5.0kb downstream 5000 false Chr10: 1339810-1344809 Glycine max
Glyma.10G015100 10.0kb upstream 10.0kb upstream 10721 true Chr10: 1329089-1339809 Glycine max
Glyma.10G015100 10.0kb upstream 10.0kb upstream 10000 false Chr10: 1329089-1339088 Glycine max
Glyma.10G015100 10.0kb downstream 10.0kb downstream 10721 true Chr10: 1339089-1349809 Glycine max
Glyma.10G015100 10.0kb downstream 10.0kb downstream 10000 false Chr10: 1339810-1349809 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314154 5265 Fabidae View MSA
124069714 5270 Rosid View MSA
123741153 5271 Pentapetalae View MSA
122791479 5272 Eudicot View MSA
122048852 5273 Angiosperm View MSA
121311139 5274 Embryophyte View MSA
123348476 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 68.5575 0.0 182.955 High High
cufflinks 0.0232575 0.0 0.111823 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.12745 0.0 0.527802 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.02     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 20.174     High High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.017     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.023     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 23.071     High High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.033     Low  

0 Strain