Gene : Glyma.10G016200 G. max Wm82.a2.v1
Defline:  (1 of 4) 4.2.1.2 - Fumarate hydratase / Fumarase Genomic Order:  162
Name:  ? Glyma.10G016200 Secondary Identifier:  ? PAC:30474502
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-5464 Glycine max pathologic  
Gmax PWY-561 Glycine max pathologic  
Gmax PWY-5690 Glycine max pathologic  

Genomics

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Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G016200 0.5kb upstream 0.5kb upstream 7479 true Chr10: 1458017-1465495 Glycine max
Glyma.10G016200 0.5kb upstream 0.5kb upstream 500 false Chr10: 1458017-1458516 Glycine max
Glyma.10G016200 0.5kb downstream 0.5kb downstream 7479 true Chr10: 1458517-1465995 Glycine max
Glyma.10G016200 0.5kb downstream 0.5kb downstream 500 false Chr10: 1465496-1465995 Glycine max
Glyma.10G016200 1.0kb upstream 1.0kb upstream 7979 true Chr10: 1457517-1465495 Glycine max
Glyma.10G016200 1.0kb upstream 1.0kb upstream 1000 false Chr10: 1457517-1458516 Glycine max
Glyma.10G016200 1.0kb downstream 1.0kb downstream 7979 true Chr10: 1458517-1466495 Glycine max
Glyma.10G016200 1.0kb downstream 1.0kb downstream 1000 false Chr10: 1465496-1466495 Glycine max
Glyma.10G016200 2.0kb upstream 2.0kb upstream 8979 true Chr10: 1456517-1465495 Glycine max
Glyma.10G016200 2.0kb upstream 2.0kb upstream 2000 false Chr10: 1456517-1458516 Glycine max
Glyma.10G016200 2.0kb downstream 2.0kb downstream 8979 true Chr10: 1458517-1467495 Glycine max
Glyma.10G016200 2.0kb downstream 2.0kb downstream 2000 false Chr10: 1465496-1467495 Glycine max
Glyma.10G016200 5.0kb upstream 5.0kb upstream 11979 true Chr10: 1453517-1465495 Glycine max
Glyma.10G016200 5.0kb upstream 5.0kb upstream 5000 false Chr10: 1453517-1458516 Glycine max
Glyma.10G016200 5.0kb downstream 5.0kb downstream 11979 true Chr10: 1458517-1470495 Glycine max
Glyma.10G016200 5.0kb downstream 5.0kb downstream 5000 false Chr10: 1465496-1470495 Glycine max
Glyma.10G016200 10.0kb upstream 10.0kb upstream 16979 true Chr10: 1448517-1465495 Glycine max
Glyma.10G016200 10.0kb upstream 10.0kb upstream 10000 false Chr10: 1448517-1458516 Glycine max
Glyma.10G016200 10.0kb downstream 10.0kb downstream 16979 true Chr10: 1458517-1475495 Glycine max
Glyma.10G016200 10.0kb downstream 10.0kb downstream 10000 false Chr10: 1465496-1475495 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307847 5265 Fabidae View MSA
124069053 5270 Rosid View MSA
123742189 5271 Pentapetalae View MSA
122791396 5272 Eudicot View MSA
122047120 5273 Angiosperm View MSA
121349544 5274 Embryophyte View MSA
123423814 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 24.1926 0.0 76.4099 High  
cufflinks 10.7595 0.0 38.9535    
cufflinks 10.7849 0.0 38.3115    
cufflinks 11.7717 0.0 35.0103    
cufflinks 31.443 0.0 127.998 High High
cufflinks 27.1271 0.0 103.982 High High
cufflinks 4.67082 0.0 15.4229   Low
cufflinks 11.6462 0.0 34.5396    
cufflinks 18.7525 0.0 68.378    
cufflinks 4.346       High
cufflinks 2.869        
cufflinks 1.99        
cufflinks 6.581       High
cufflinks 7.252     High High
cufflinks 1.578        
cufflinks 1.36        
cufflinks 2.783        
cufflinks 2.573        
cufflinks 2.119        
cufflinks 1.073       Low
cufflinks 3.23        
cufflinks 1.399        
cufflinks 1.4        
cufflinks 4.353       High
cufflinks 1.053       Low
cufflinks 2.235        

0 Strain