Gene : Glyma.10G017700 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10459//PTHR10459:SF59 - DNA LIGASE Genomic Order:  177
Name:  ? Glyma.10G017700 Secondary Identifier:  ? PAC:30478331
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G017700 0.5kb upstream 0.5kb upstream 6614 true Chr10: 1545893-1552506 Glycine max
Glyma.10G017700 0.5kb upstream 0.5kb upstream 500 false Chr10: 1545893-1546392 Glycine max
Glyma.10G017700 0.5kb downstream 0.5kb downstream 6614 true Chr10: 1546393-1553006 Glycine max
Glyma.10G017700 0.5kb downstream 0.5kb downstream 500 false Chr10: 1552507-1553006 Glycine max
Glyma.10G017700 1.0kb upstream 1.0kb upstream 7114 true Chr10: 1545393-1552506 Glycine max
Glyma.10G017700 1.0kb upstream 1.0kb upstream 1000 false Chr10: 1545393-1546392 Glycine max
Glyma.10G017700 1.0kb downstream 1.0kb downstream 7114 true Chr10: 1546393-1553506 Glycine max
Glyma.10G017700 1.0kb downstream 1.0kb downstream 1000 false Chr10: 1552507-1553506 Glycine max
Glyma.10G017700 2.0kb upstream 2.0kb upstream 8114 true Chr10: 1544393-1552506 Glycine max
Glyma.10G017700 2.0kb upstream 2.0kb upstream 2000 false Chr10: 1544393-1546392 Glycine max
Glyma.10G017700 2.0kb downstream 2.0kb downstream 8114 true Chr10: 1546393-1554506 Glycine max
Glyma.10G017700 2.0kb downstream 2.0kb downstream 2000 false Chr10: 1552507-1554506 Glycine max
Glyma.10G017700 5.0kb upstream 5.0kb upstream 11114 true Chr10: 1541393-1552506 Glycine max
Glyma.10G017700 5.0kb upstream 5.0kb upstream 5000 false Chr10: 1541393-1546392 Glycine max
Glyma.10G017700 5.0kb downstream 5.0kb downstream 11114 true Chr10: 1546393-1557506 Glycine max
Glyma.10G017700 5.0kb downstream 5.0kb downstream 5000 false Chr10: 1552507-1557506 Glycine max
Glyma.10G017700 10.0kb upstream 10.0kb upstream 16114 true Chr10: 1536393-1552506 Glycine max
Glyma.10G017700 10.0kb upstream 10.0kb upstream 10000 false Chr10: 1536393-1546392 Glycine max
Glyma.10G017700 10.0kb downstream 10.0kb downstream 16114 true Chr10: 1546393-1562506 Glycine max
Glyma.10G017700 10.0kb downstream 10.0kb downstream 10000 false Chr10: 1552507-1562506 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308517 5265 Fabidae View MSA
124074369 5270 Rosid View MSA
123750076 5271 Pentapetalae View MSA
122797319 5272 Eudicot View MSA
122051365 5273 Angiosperm View MSA
121345540 5274 Embryophyte View MSA
123380235 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.66451 0.0 5.4413   Low
cufflinks 5.02144 0.0 14.1653   High
cufflinks 1.99963 0.0 6.35376    
cufflinks 2.91379 0.0 8.786    
cufflinks 2.9915 0.0 9.00888    
cufflinks 1.84186 0.0 5.94602   Low
cufflinks 3.43352 0.0 10.1646    
cufflinks 2.69296 0.0 8.22071    
cufflinks 4.03789 0.0 11.6824   High
cufflinks 0.816        
cufflinks 0.851        
cufflinks 1.276        
cufflinks 1.416        
cufflinks 1.425        
cufflinks 5.731     High High
cufflinks 1.692        
cufflinks 0.454       Low
cufflinks 1.287        
cufflinks 3.08       High
cufflinks 1.044        
cufflinks 2.236        
cufflinks 1.866        
cufflinks 1.657        
cufflinks 0.983        
cufflinks 1.057        
cufflinks 1.947        

0 Strain