Gene : Glyma.10G004100 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31008:SF0 - COP1-INTERACTING PROTEIN-LIKE PROTEIN Genomic Order:  41
Name:  ? Glyma.10G004100 Secondary Identifier:  ? PAC:30474194
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G004100 0.5kb upstream 0.5kb upstream 10081 true Chr10: 407076-417156 Glycine max
Glyma.10G004100 0.5kb upstream 0.5kb upstream 500 false Chr10: 407076-407575 Glycine max
Glyma.10G004100 0.5kb downstream 0.5kb downstream 10081 true Chr10: 407576-417656 Glycine max
Glyma.10G004100 0.5kb downstream 0.5kb downstream 500 false Chr10: 417157-417656 Glycine max
Glyma.10G004100 1.0kb upstream 1.0kb upstream 10581 true Chr10: 406576-417156 Glycine max
Glyma.10G004100 1.0kb upstream 1.0kb upstream 1000 false Chr10: 406576-407575 Glycine max
Glyma.10G004100 1.0kb downstream 1.0kb downstream 10581 true Chr10: 407576-418156 Glycine max
Glyma.10G004100 1.0kb downstream 1.0kb downstream 1000 false Chr10: 417157-418156 Glycine max
Glyma.10G004100 2.0kb upstream 2.0kb upstream 11581 true Chr10: 405576-417156 Glycine max
Glyma.10G004100 2.0kb upstream 2.0kb upstream 2000 false Chr10: 405576-407575 Glycine max
Glyma.10G004100 2.0kb downstream 2.0kb downstream 11581 true Chr10: 407576-419156 Glycine max
Glyma.10G004100 2.0kb downstream 2.0kb downstream 2000 false Chr10: 417157-419156 Glycine max
Glyma.10G004100 5.0kb upstream 5.0kb upstream 14581 true Chr10: 402576-417156 Glycine max
Glyma.10G004100 5.0kb upstream 5.0kb upstream 5000 false Chr10: 402576-407575 Glycine max
Glyma.10G004100 5.0kb downstream 5.0kb downstream 14581 true Chr10: 407576-422156 Glycine max
Glyma.10G004100 5.0kb downstream 5.0kb downstream 5000 false Chr10: 417157-422156 Glycine max
Glyma.10G004100 10.0kb upstream 10.0kb upstream 19581 true Chr10: 397576-417156 Glycine max
Glyma.10G004100 10.0kb upstream 10.0kb upstream 10000 false Chr10: 397576-407575 Glycine max
Glyma.10G004100 10.0kb downstream 10.0kb downstream 19581 true Chr10: 407576-427156 Glycine max
Glyma.10G004100 10.0kb downstream 10.0kb downstream 10000 false Chr10: 417157-427156 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122254649 5265 Fabidae View MSA
124060773 5270 Rosid View MSA
123744546 5271 Pentapetalae View MSA
122797843 5272 Eudicot View MSA
122048758 5273 Angiosperm View MSA
121350762 5274 Embryophyte View MSA
123381879 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.0108 0.0 4.45542    
cufflinks 2.36484 0.0 9.48341   High
cufflinks 0.853522 0.0 3.97076    
cufflinks 1.03312 0.0 4.68466    
cufflinks 1.2945 0.0 5.38494    
cufflinks 0.754683 0.0 3.6476   Low
cufflinks 2.61187 0.0 10.4536   High
cufflinks 1.13232 0.0 4.89675    
cufflinks 1.7021 0.0 6.517    
cufflinks 0.49        
cufflinks 0.08       Low
cufflinks 0.605        
cufflinks 0.459        
cufflinks 0.489        
cufflinks 0.268        
cufflinks 0.483        
cufflinks 0.158       Low
cufflinks 1.107       High
cufflinks 0.925       High
cufflinks 0.576        
cufflinks 0.142       Low
cufflinks 0.686        
cufflinks 0.681        
cufflinks 0.078       Low
cufflinks 0.621        
cufflinks 0.194        

0 Strain