Gene : Glyma.10G004400 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR10219//PTHR10219:SF36 - GLYCOLIPID TRANSFER PROTEIN-RELATED Genomic Order:  44
Name:  ? Glyma.10G004400 Secondary Identifier:  ? PAC:30476591
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G004400 0.5kb upstream 0.5kb upstream 6251 true Chr10: 432609-438859 Glycine max
Glyma.10G004400 0.5kb upstream 0.5kb upstream 500 false Chr10: 432609-433108 Glycine max
Glyma.10G004400 0.5kb downstream 0.5kb downstream 6251 true Chr10: 433109-439359 Glycine max
Glyma.10G004400 0.5kb downstream 0.5kb downstream 500 false Chr10: 438860-439359 Glycine max
Glyma.10G004400 1.0kb upstream 1.0kb upstream 6751 true Chr10: 432109-438859 Glycine max
Glyma.10G004400 1.0kb upstream 1.0kb upstream 1000 false Chr10: 432109-433108 Glycine max
Glyma.10G004400 1.0kb downstream 1.0kb downstream 6751 true Chr10: 433109-439859 Glycine max
Glyma.10G004400 1.0kb downstream 1.0kb downstream 1000 false Chr10: 438860-439859 Glycine max
Glyma.10G004400 2.0kb upstream 2.0kb upstream 7751 true Chr10: 431109-438859 Glycine max
Glyma.10G004400 2.0kb upstream 2.0kb upstream 2000 false Chr10: 431109-433108 Glycine max
Glyma.10G004400 2.0kb downstream 2.0kb downstream 7751 true Chr10: 433109-440859 Glycine max
Glyma.10G004400 2.0kb downstream 2.0kb downstream 2000 false Chr10: 438860-440859 Glycine max
Glyma.10G004400 5.0kb upstream 5.0kb upstream 10751 true Chr10: 428109-438859 Glycine max
Glyma.10G004400 5.0kb upstream 5.0kb upstream 5000 false Chr10: 428109-433108 Glycine max
Glyma.10G004400 5.0kb downstream 5.0kb downstream 10751 true Chr10: 433109-443859 Glycine max
Glyma.10G004400 5.0kb downstream 5.0kb downstream 5000 false Chr10: 438860-443859 Glycine max
Glyma.10G004400 10.0kb upstream 10.0kb upstream 15751 true Chr10: 423109-438859 Glycine max
Glyma.10G004400 10.0kb upstream 10.0kb upstream 10000 false Chr10: 423109-433108 Glycine max
Glyma.10G004400 10.0kb downstream 10.0kb downstream 15751 true Chr10: 433109-448859 Glycine max
Glyma.10G004400 10.0kb downstream 10.0kb downstream 10000 false Chr10: 438860-448859 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309561 5265 Fabidae View MSA
124067771 5270 Rosid View MSA
123743088 5271 Pentapetalae View MSA
122789980 5272 Eudicot View MSA
122044552 5273 Angiosperm View MSA
121347135 5274 Embryophyte View MSA
123426578 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.96451 0.0 26.6985   Low
cufflinks 15.3593 0.0 57.7844    
cufflinks 10.4151 0.0 41.5208    
cufflinks 13.8607 0.0 52.6574    
cufflinks 23.592 0.0 83.6317 High High
cufflinks 21.8916 0.0 77.8171    
cufflinks 19.6149 0.0 70.6495    
cufflinks 17.0136 0.0 62.3033    
cufflinks 17.1073 0.0 63.0314    
cufflinks 1.527       High
cufflinks 0.399       Low
cufflinks 0.807        
cufflinks 1.999       High
cufflinks 2.502       High
cufflinks 0.418       Low
cufflinks 0.62        
cufflinks 0.564        
cufflinks 1.509       High
cufflinks 1.134        
cufflinks 0.453        
cufflinks 0.567        
cufflinks 0.627        
cufflinks 0.811        
cufflinks 0.479        
cufflinks 0.596        
cufflinks 0.666        

0 Strain