Gene : Glyma.10G006500 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR23382//PTHR23382:SF7 - MALATE DEHYDROGENASE Genomic Order:  65
Name:  ? Glyma.10G006500 Secondary Identifier:  ? PAC:30473827
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax GLUCONEO-PWY Glycine max pathologic  
Gmax GLYOXYLATE-BYPASS Glycine max pathologic  
Gmax PWY-5464 Glycine max pathologic  
Gmax PWY-561 Glycine max pathologic  
Gmax PWY-5690 Glycine max pathologic  
Gmax PWY-7115 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G006500 0.5kb upstream 0.5kb upstream 4259 true Chr10: 632923-637181 Glycine max
Glyma.10G006500 0.5kb upstream 0.5kb upstream 500 false Chr10: 632923-633422 Glycine max
Glyma.10G006500 0.5kb downstream 0.5kb downstream 4259 true Chr10: 633423-637681 Glycine max
Glyma.10G006500 0.5kb downstream 0.5kb downstream 500 false Chr10: 637182-637681 Glycine max
Glyma.10G006500 1.0kb upstream 1.0kb upstream 4759 true Chr10: 632423-637181 Glycine max
Glyma.10G006500 1.0kb upstream 1.0kb upstream 1000 false Chr10: 632423-633422 Glycine max
Glyma.10G006500 1.0kb downstream 1.0kb downstream 4759 true Chr10: 633423-638181 Glycine max
Glyma.10G006500 1.0kb downstream 1.0kb downstream 1000 false Chr10: 637182-638181 Glycine max
Glyma.10G006500 2.0kb upstream 2.0kb upstream 5759 true Chr10: 631423-637181 Glycine max
Glyma.10G006500 2.0kb upstream 2.0kb upstream 2000 false Chr10: 631423-633422 Glycine max
Glyma.10G006500 2.0kb downstream 2.0kb downstream 5759 true Chr10: 633423-639181 Glycine max
Glyma.10G006500 2.0kb downstream 2.0kb downstream 2000 false Chr10: 637182-639181 Glycine max
Glyma.10G006500 5.0kb upstream 5.0kb upstream 8759 true Chr10: 628423-637181 Glycine max
Glyma.10G006500 5.0kb upstream 5.0kb upstream 5000 false Chr10: 628423-633422 Glycine max
Glyma.10G006500 5.0kb downstream 5.0kb downstream 8759 true Chr10: 633423-642181 Glycine max
Glyma.10G006500 5.0kb downstream 5.0kb downstream 5000 false Chr10: 637182-642181 Glycine max
Glyma.10G006500 10.0kb upstream 10.0kb upstream 13759 true Chr10: 623423-637181 Glycine max
Glyma.10G006500 10.0kb upstream 10.0kb upstream 10000 false Chr10: 623423-633422 Glycine max
Glyma.10G006500 10.0kb downstream 10.0kb downstream 13759 true Chr10: 633423-647181 Glycine max
Glyma.10G006500 10.0kb downstream 10.0kb downstream 10000 false Chr10: 637182-647181 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303354 5265 Fabidae View MSA
124064013 5270 Rosid View MSA
123739138 5271 Pentapetalae View MSA
122789281 5272 Eudicot View MSA
122050336 5273 Angiosperm View MSA
121345674 5274 Embryophyte View MSA
123426378 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 158.016 0.0 801.481 High  
cufflinks 187.512 0.0 1054.52 High  
cufflinks 61.1892 0.0 258.605 High Low
cufflinks 178.65 0.0 977.528 High  
cufflinks 362.757 0.0 3111.68 High High
cufflinks 243.684 0.0 1092.88 High  
cufflinks 186.723 0.0 1058.62 High  
cufflinks 221.864 0.0 1422.09 High  
cufflinks 194.743 0.0 1152.65 High  
cufflinks 65.831     High High
cufflinks 6.863     High Low
cufflinks 20.032     High  
cufflinks 91.177     High High
cufflinks 115.294     High High
cufflinks 16.958     High  
cufflinks 27.001     High  
cufflinks 17.285     High  
cufflinks 33.84     High  
cufflinks 56.75     High High
cufflinks 21.257     High  
cufflinks 13.774     High  
cufflinks 25.538     High  
cufflinks 30.885     High  
cufflinks 9.98     High Low
cufflinks 25.554     High  
cufflinks 23.168     High  

0 Strain