Gene : Glyma.10G008400 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR31100:SF3 - AT-HOOK MOTIF NUCLEAR LOCALIZED PROTEIN 19-RELATED Genomic Order:  84
Name:  ? Glyma.10G008400 Secondary Identifier:  ? PAC:30473663
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G008400 0.5kb upstream 0.5kb upstream 2759 true Chr10: 812287-815045 Glycine max
Glyma.10G008400 0.5kb upstream 0.5kb upstream 500 false Chr10: 812287-812786 Glycine max
Glyma.10G008400 0.5kb downstream 0.5kb downstream 2759 true Chr10: 812787-815545 Glycine max
Glyma.10G008400 0.5kb downstream 0.5kb downstream 500 false Chr10: 815046-815545 Glycine max
Glyma.10G008400 1.0kb upstream 1.0kb upstream 3259 true Chr10: 811787-815045 Glycine max
Glyma.10G008400 1.0kb upstream 1.0kb upstream 1000 false Chr10: 811787-812786 Glycine max
Glyma.10G008400 1.0kb downstream 1.0kb downstream 3259 true Chr10: 812787-816045 Glycine max
Glyma.10G008400 1.0kb downstream 1.0kb downstream 1000 false Chr10: 815046-816045 Glycine max
Glyma.10G008400 2.0kb upstream 2.0kb upstream 4259 true Chr10: 810787-815045 Glycine max
Glyma.10G008400 2.0kb upstream 2.0kb upstream 2000 false Chr10: 810787-812786 Glycine max
Glyma.10G008400 2.0kb downstream 2.0kb downstream 4259 true Chr10: 812787-817045 Glycine max
Glyma.10G008400 2.0kb downstream 2.0kb downstream 2000 false Chr10: 815046-817045 Glycine max
Glyma.10G008400 5.0kb upstream 5.0kb upstream 7259 true Chr10: 807787-815045 Glycine max
Glyma.10G008400 5.0kb upstream 5.0kb upstream 5000 false Chr10: 807787-812786 Glycine max
Glyma.10G008400 5.0kb downstream 5.0kb downstream 7259 true Chr10: 812787-820045 Glycine max
Glyma.10G008400 5.0kb downstream 5.0kb downstream 5000 false Chr10: 815046-820045 Glycine max
Glyma.10G008400 10.0kb upstream 10.0kb upstream 12259 true Chr10: 802787-815045 Glycine max
Glyma.10G008400 10.0kb upstream 10.0kb upstream 10000 false Chr10: 802787-812786 Glycine max
Glyma.10G008400 10.0kb downstream 10.0kb downstream 12259 true Chr10: 812787-825045 Glycine max
Glyma.10G008400 10.0kb downstream 10.0kb downstream 10000 false Chr10: 815046-825045 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304888 5265 Fabidae View MSA
124071129 5270 Rosid View MSA
123751689 5271 Pentapetalae View MSA
122796160 5272 Eudicot View MSA
122048201 5273 Angiosperm View MSA
121348557 5274 Embryophyte View MSA
123380913 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.786995 0.0 2.79758    
cufflinks 0.0102113 0.0 0.0463084 Low Low
cufflinks 0.0589544 0.0 0.236481 Low Low
cufflinks 0.20192 0.0 0.771806    
cufflinks 26.8829 0.0 73.076 High  
cufflinks 45.8034 0.0 130.91 High High
cufflinks 1.44579 0.0 4.83948    
cufflinks 5.91621 0.0 16.4856    
cufflinks 36.9339 0.0 102.977 High High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 8.495     High  
cufflinks 0.014     Low Low
cufflinks 17.493     High  
cufflinks 8.854     High  
cufflinks 5.711     High  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 14.017     High  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 21.56     High  
cufflinks 0.005     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 24.531     High  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 18.504     High  

0 Strain