Gene : Glyma.10G010000 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR31375:SF43 - GLYCOSIDE HYDROLASE FAMILY 28 PROTEIN / POLYGALACTURONASE (PECTINASE) FAMILY PROTEIN Genomic Order:  100
Name:  ? Glyma.10G010000 Secondary Identifier:  ? PAC:30474395
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-1081 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G010000 0.5kb upstream 0.5kb upstream 3188 true Chr10: 934607-937794 Glycine max
Glyma.10G010000 0.5kb upstream 0.5kb upstream 500 false Chr10: 934607-935106 Glycine max
Glyma.10G010000 0.5kb downstream 0.5kb downstream 3188 true Chr10: 935107-938294 Glycine max
Glyma.10G010000 0.5kb downstream 0.5kb downstream 500 false Chr10: 937795-938294 Glycine max
Glyma.10G010000 1.0kb upstream 1.0kb upstream 3688 true Chr10: 934107-937794 Glycine max
Glyma.10G010000 1.0kb upstream 1.0kb upstream 1000 false Chr10: 934107-935106 Glycine max
Glyma.10G010000 1.0kb downstream 1.0kb downstream 3688 true Chr10: 935107-938794 Glycine max
Glyma.10G010000 1.0kb downstream 1.0kb downstream 1000 false Chr10: 937795-938794 Glycine max
Glyma.10G010000 2.0kb upstream 2.0kb upstream 4688 true Chr10: 933107-937794 Glycine max
Glyma.10G010000 2.0kb upstream 2.0kb upstream 2000 false Chr10: 933107-935106 Glycine max
Glyma.10G010000 2.0kb downstream 2.0kb downstream 4688 true Chr10: 935107-939794 Glycine max
Glyma.10G010000 2.0kb downstream 2.0kb downstream 2000 false Chr10: 937795-939794 Glycine max
Glyma.10G010000 5.0kb upstream 5.0kb upstream 7688 true Chr10: 930107-937794 Glycine max
Glyma.10G010000 5.0kb upstream 5.0kb upstream 5000 false Chr10: 930107-935106 Glycine max
Glyma.10G010000 5.0kb downstream 5.0kb downstream 7688 true Chr10: 935107-942794 Glycine max
Glyma.10G010000 5.0kb downstream 5.0kb downstream 5000 false Chr10: 937795-942794 Glycine max
Glyma.10G010000 10.0kb upstream 10.0kb upstream 12688 true Chr10: 925107-937794 Glycine max
Glyma.10G010000 10.0kb upstream 10.0kb upstream 10000 false Chr10: 925107-935106 Glycine max
Glyma.10G010000 10.0kb downstream 10.0kb downstream 12688 true Chr10: 935107-947794 Glycine max
Glyma.10G010000 10.0kb downstream 10.0kb downstream 10000 false Chr10: 937795-947794 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312422 5265 Fabidae View MSA
124066514 5270 Rosid View MSA
123746353 5271 Pentapetalae View MSA
122791695 5272 Eudicot View MSA
122048646 5273 Angiosperm View MSA
121350352 5274 Embryophyte View MSA
123381691 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.129059 0.0 0.508245 Low  
cufflinks 0.17147 0.0 0.667979 Low  
cufflinks 0.587738 0.0 2.16094    
cufflinks 2.20958 0.0 7.25715   High
cufflinks 0.709538 0.0 2.58752    
cufflinks 0.0754637 0.0 0.302945 Low Low
cufflinks 0.433654 0.0 1.62289    
cufflinks 0.046368 0.0 0.19033 Low Low
cufflinks 1.03278 0.0 3.66877    
cufflinks 0.012     Low Low
cufflinks 1.299        
cufflinks 1.5        
cufflinks 1.417        
cufflinks 0.668        
cufflinks 1.047        
cufflinks 0.013     Low Low
cufflinks 0.641        
cufflinks 3.266        
cufflinks 0.117        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 3.619        
cufflinks 0.006     Low Low
cufflinks 0.007     Low Low
cufflinks 3.102        
cufflinks 0.005     Low Low
cufflinks 5.323       High

0 Strain