Gene : Glyma.09G283600 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR10694:SF33 - TRANSCRIPTION FACTOR JUMONJI (JMJ) FAMILY PROTEIN / ZINC FINGER (C5HC2 TYPE) FAMILY PROTEIN Genomic Order:  2836
Name:  ? Glyma.09G283600 Secondary Identifier:  ? PAC:30486394
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G283600 0.5kb upstream 0.5kb upstream 5959 true Chr09: 49902671-49908629 Glycine max
Glyma.09G283600 0.5kb upstream 0.5kb upstream 500 false Chr09: 49902671-49903170 Glycine max
Glyma.09G283600 0.5kb downstream 0.5kb downstream 5959 true Chr09: 49903171-49909129 Glycine max
Glyma.09G283600 0.5kb downstream 0.5kb downstream 500 false Chr09: 49908630-49909129 Glycine max
Glyma.09G283600 1.0kb upstream 1.0kb upstream 6459 true Chr09: 49902171-49908629 Glycine max
Glyma.09G283600 1.0kb upstream 1.0kb upstream 1000 false Chr09: 49902171-49903170 Glycine max
Glyma.09G283600 1.0kb downstream 1.0kb downstream 6459 true Chr09: 49903171-49909629 Glycine max
Glyma.09G283600 1.0kb downstream 1.0kb downstream 1000 false Chr09: 49908630-49909629 Glycine max
Glyma.09G283600 2.0kb upstream 2.0kb upstream 7459 true Chr09: 49901171-49908629 Glycine max
Glyma.09G283600 2.0kb upstream 2.0kb upstream 2000 false Chr09: 49901171-49903170 Glycine max
Glyma.09G283600 2.0kb downstream 2.0kb downstream 7459 true Chr09: 49903171-49910629 Glycine max
Glyma.09G283600 2.0kb downstream 2.0kb downstream 2000 false Chr09: 49908630-49910629 Glycine max
Glyma.09G283600 5.0kb upstream 5.0kb upstream 10459 true Chr09: 49898171-49908629 Glycine max
Glyma.09G283600 5.0kb upstream 5.0kb upstream 5000 false Chr09: 49898171-49903170 Glycine max
Glyma.09G283600 5.0kb downstream 5.0kb downstream 10459 true Chr09: 49903171-49913629 Glycine max
Glyma.09G283600 5.0kb downstream 5.0kb downstream 5000 false Chr09: 49908630-49913629 Glycine max
Glyma.09G283600 10.0kb upstream 10.0kb upstream 15459 true Chr09: 49893171-49908629 Glycine max
Glyma.09G283600 10.0kb upstream 10.0kb upstream 10000 false Chr09: 49893171-49903170 Glycine max
Glyma.09G283600 10.0kb downstream 10.0kb downstream 15459 true Chr09: 49903171-49918629 Glycine max
Glyma.09G283600 10.0kb downstream 10.0kb downstream 10000 false Chr09: 49908630-49918629 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296597 5265 Fabidae View MSA
124075033 5270 Rosid View MSA
123746052 5271 Pentapetalae View MSA
122771756 5272 Eudicot View MSA
122050637 5273 Angiosperm View MSA
123428928 5275 Viridiplantae View MSA
121350129 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0191196 0.0 0.0857247 Low  
cufflinks 0.184189 0.0 0.931192 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0432105 0.0 0.176981 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.00893154 0.0 0.047214 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.668746 0.0 2.9894   High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.005     Low  
cufflinks 0.018     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.11       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.059     Low High
cufflinks 0.003     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.002     Low  
cufflinks 0.001     Low Low

0 Strain