Gene : Glyma.09G286500 G. max Wm82.a2.v1
Defline:  (1 of 10) PTHR22731//PTHR22731:SF9 - RIBONUCLEASES P/MRP PROTEIN SUBUNIT POP1 Genomic Order:  2865
Name:  ? Glyma.09G286500 Secondary Identifier:  ? PAC:30485984
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G286500 0.5kb upstream 0.5kb upstream 10731 true Chr09: 50178277-50189007 Glycine max
Glyma.09G286500 0.5kb upstream 0.5kb upstream 500 false Chr09: 50178277-50178776 Glycine max
Glyma.09G286500 0.5kb downstream 0.5kb downstream 10731 true Chr09: 50178777-50189507 Glycine max
Glyma.09G286500 0.5kb downstream 0.5kb downstream 500 false Chr09: 50189008-50189507 Glycine max
Glyma.09G286500 1.0kb upstream 1.0kb upstream 11231 true Chr09: 50177777-50189007 Glycine max
Glyma.09G286500 1.0kb upstream 1.0kb upstream 1000 false Chr09: 50177777-50178776 Glycine max
Glyma.09G286500 1.0kb downstream 1.0kb downstream 10988 true Chr09: 50178777-50189764 Glycine max
Glyma.09G286500 1.0kb downstream 1.0kb downstream 757 false Chr09: 50189008-50189764 Glycine max
Glyma.09G286500 2.0kb upstream 2.0kb upstream 12231 true Chr09: 50176777-50189007 Glycine max
Glyma.09G286500 2.0kb upstream 2.0kb upstream 2000 false Chr09: 50176777-50178776 Glycine max
Glyma.09G286500 2.0kb downstream 2.0kb downstream 10988 true Chr09: 50178777-50189764 Glycine max
Glyma.09G286500 2.0kb downstream 2.0kb downstream 757 false Chr09: 50189008-50189764 Glycine max
Glyma.09G286500 5.0kb upstream 5.0kb upstream 15231 true Chr09: 50173777-50189007 Glycine max
Glyma.09G286500 5.0kb upstream 5.0kb upstream 5000 false Chr09: 50173777-50178776 Glycine max
Glyma.09G286500 5.0kb downstream 5.0kb downstream 10988 true Chr09: 50178777-50189764 Glycine max
Glyma.09G286500 5.0kb downstream 5.0kb downstream 757 false Chr09: 50189008-50189764 Glycine max
Glyma.09G286500 10.0kb upstream 10.0kb upstream 20231 true Chr09: 50168777-50189007 Glycine max
Glyma.09G286500 10.0kb upstream 10.0kb upstream 10000 false Chr09: 50168777-50178776 Glycine max
Glyma.09G286500 10.0kb downstream 10.0kb downstream 10988 true Chr09: 50178777-50189764 Glycine max
Glyma.09G286500 10.0kb downstream 10.0kb downstream 757 false Chr09: 50189008-50189764 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121615379 5273 Angiosperm View MSA
122250252 5265 Fabidae View MSA
123993516 5270 Rosid View MSA
123568283 5271 Pentapetalae View MSA
122603029 5272 Eudicot View MSA
120887573 5274 Embryophyte View MSA
122928327 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.21089 0.0 4.11001   High
cufflinks 0.884005 0.0 3.0952    
cufflinks 0.421924 0.0 1.55103    
cufflinks 0.695302 0.0 2.47797    
cufflinks 0.633327 0.0 2.27299    
cufflinks 0.258462 0.0 0.973919 Low Low
cufflinks 0.580325 0.0 2.09624    
cufflinks 0.50945 0.0 1.85318    
cufflinks 0.602511 0.0 2.16933    
cufflinks 0.089     Low  
cufflinks 0.071        
cufflinks 0.109     Low  
cufflinks 0.083     Low  
cufflinks 0.135        
cufflinks 0.094        
cufflinks 0.115        
cufflinks 0.036     Low Low
cufflinks 0.126        
cufflinks 0.312       High
cufflinks 0.088     Low  
cufflinks 0.104        
cufflinks 0.123        
cufflinks 0.214       High
cufflinks 0.043     Low Low
cufflinks 0.119        
cufflinks 0.082        

0 Strain