Gene : Glyma.10G000600 G. max Wm82.a2.v1
Defline:  (1 of 24) PF01535//PF13812 - PPR repeat (PPR) // Pentatricopeptide repeat domain (PPR_3) Genomic Order:  6
Name:  ? Glyma.10G000600 Secondary Identifier:  ? PAC:30474286
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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G000600 0.5kb upstream 0.5kb upstream 4244 true Chr10: 84337-88580 Glycine max
Glyma.10G000600 0.5kb upstream 0.5kb upstream 500 false Chr10: 88081-88580 Glycine max
Glyma.10G000600 0.5kb downstream 0.5kb downstream 4244 true Chr10: 83837-88080 Glycine max
Glyma.10G000600 0.5kb downstream 0.5kb downstream 500 false Chr10: 83837-84336 Glycine max
Glyma.10G000600 1.0kb upstream 1.0kb upstream 4744 true Chr10: 84337-89080 Glycine max
Glyma.10G000600 1.0kb upstream 1.0kb upstream 1000 false Chr10: 88081-89080 Glycine max
Glyma.10G000600 1.0kb downstream 1.0kb downstream 4744 true Chr10: 83337-88080 Glycine max
Glyma.10G000600 1.0kb downstream 1.0kb downstream 1000 false Chr10: 83337-84336 Glycine max
Glyma.10G000600 2.0kb upstream 2.0kb upstream 5744 true Chr10: 84337-90080 Glycine max
Glyma.10G000600 2.0kb upstream 2.0kb upstream 2000 false Chr10: 88081-90080 Glycine max
Glyma.10G000600 2.0kb downstream 2.0kb downstream 5744 true Chr10: 82337-88080 Glycine max
Glyma.10G000600 2.0kb downstream 2.0kb downstream 2000 false Chr10: 82337-84336 Glycine max
Glyma.10G000600 5.0kb upstream 5.0kb upstream 8744 true Chr10: 84337-93080 Glycine max
Glyma.10G000600 5.0kb upstream 5.0kb upstream 5000 false Chr10: 88081-93080 Glycine max
Glyma.10G000600 5.0kb downstream 5.0kb downstream 8744 true Chr10: 79337-88080 Glycine max
Glyma.10G000600 5.0kb downstream 5.0kb downstream 5000 false Chr10: 79337-84336 Glycine max
Glyma.10G000600 10.0kb upstream 10.0kb upstream 13744 true Chr10: 84337-98080 Glycine max
Glyma.10G000600 10.0kb upstream 10.0kb upstream 10000 false Chr10: 88081-98080 Glycine max
Glyma.10G000600 10.0kb downstream 10.0kb downstream 13744 true Chr10: 74337-88080 Glycine max
Glyma.10G000600 10.0kb downstream 10.0kb downstream 10000 false Chr10: 74337-84336 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311646 5265 Fabidae View MSA
124068490 5270 Rosid View MSA
123736856 5271 Pentapetalae View MSA
122790484 5272 Eudicot View MSA
122044724 5273 Angiosperm View MSA
121351065 5274 Embryophyte View MSA
123381996 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.09129 0.0 21.7828   High
cufflinks 6.89284 0.0 18.6985    
cufflinks 3.14918 0.0 9.17694   Low
cufflinks 4.11594 0.0 11.6457    
cufflinks 7.24234 0.0 19.6085    
cufflinks 4.69539 0.0 13.1249    
cufflinks 6.918 0.0 18.7972    
cufflinks 4.82833 0.0 13.4425    
cufflinks 5.84983 0.0 16.0385    
cufflinks 1.889        
cufflinks 0.723       Low
cufflinks 3.981        
cufflinks 6.397       High
cufflinks 8.797     High High
cufflinks 1.396        
cufflinks 2.119        
cufflinks 2.265        
cufflinks 3.517        
cufflinks 5.321       High
cufflinks 1.48        
cufflinks 0.92       Low
cufflinks 1.663        
cufflinks 3.302        
cufflinks 0.803       Low
cufflinks 1.673        
cufflinks 1.865        

0 Strain