Gene : Glyma.10G002300 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR12642:SF0 - RIBOSOME BIOGENESIS PROTEIN NSA2 HOMOLOG Genomic Order:  23
Name:  ? Glyma.10G002300 Secondary Identifier:  ? PAC:30474035
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G002300 0.5kb upstream 0.5kb upstream 3295 true Chr10: 248179-251473 Glycine max
Glyma.10G002300 0.5kb upstream 0.5kb upstream 500 false Chr10: 248179-248678 Glycine max
Glyma.10G002300 0.5kb downstream 0.5kb downstream 3295 true Chr10: 248679-251973 Glycine max
Glyma.10G002300 0.5kb downstream 0.5kb downstream 500 false Chr10: 251474-251973 Glycine max
Glyma.10G002300 1.0kb upstream 1.0kb upstream 3795 true Chr10: 247679-251473 Glycine max
Glyma.10G002300 1.0kb upstream 1.0kb upstream 1000 false Chr10: 247679-248678 Glycine max
Glyma.10G002300 1.0kb downstream 1.0kb downstream 3795 true Chr10: 248679-252473 Glycine max
Glyma.10G002300 1.0kb downstream 1.0kb downstream 1000 false Chr10: 251474-252473 Glycine max
Glyma.10G002300 2.0kb upstream 2.0kb upstream 4795 true Chr10: 246679-251473 Glycine max
Glyma.10G002300 2.0kb upstream 2.0kb upstream 2000 false Chr10: 246679-248678 Glycine max
Glyma.10G002300 2.0kb downstream 2.0kb downstream 4795 true Chr10: 248679-253473 Glycine max
Glyma.10G002300 2.0kb downstream 2.0kb downstream 2000 false Chr10: 251474-253473 Glycine max
Glyma.10G002300 5.0kb upstream 5.0kb upstream 7795 true Chr10: 243679-251473 Glycine max
Glyma.10G002300 5.0kb upstream 5.0kb upstream 5000 false Chr10: 243679-248678 Glycine max
Glyma.10G002300 5.0kb downstream 5.0kb downstream 7795 true Chr10: 248679-256473 Glycine max
Glyma.10G002300 5.0kb downstream 5.0kb downstream 5000 false Chr10: 251474-256473 Glycine max
Glyma.10G002300 10.0kb upstream 10.0kb upstream 12795 true Chr10: 238679-251473 Glycine max
Glyma.10G002300 10.0kb upstream 10.0kb upstream 10000 false Chr10: 238679-248678 Glycine max
Glyma.10G002300 10.0kb downstream 10.0kb downstream 12795 true Chr10: 248679-261473 Glycine max
Glyma.10G002300 10.0kb downstream 10.0kb downstream 10000 false Chr10: 251474-261473 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312013 5265 Fabidae View MSA
124061580 5270 Rosid View MSA
123741663 5271 Pentapetalae View MSA
122796329 5272 Eudicot View MSA
122043464 5273 Angiosperm View MSA
121344863 5274 Embryophyte View MSA
123424224 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 19.0055 0.0 50.79    
cufflinks 14.9882 0.0 40.3176    
cufflinks 7.90462 0.0 22.2387   Low
cufflinks 13.2091 0.0 35.7244    
cufflinks 24.8221 0.0 66.2532 High High
cufflinks 18.7334 0.0 50.0669    
cufflinks 16.3022 0.0 43.7294    
cufflinks 13.1829 0.0 35.6538    
cufflinks 15.4785 0.0 41.564    
cufflinks 6.616        
cufflinks 3.662       Low
cufflinks 7.439     High  
cufflinks 18.046     High High
cufflinks 25.605     High High
cufflinks 4.431        
cufflinks 5.687        
cufflinks 6.049        
cufflinks 8.807     High  
cufflinks 8.355     High  
cufflinks 4.891        
cufflinks 4.709        
cufflinks 5.423        
cufflinks 9.111     High  
cufflinks 3.993       Low
cufflinks 5.191        
cufflinks 6.502     High  

0 Strain