Gene : Glyma.10G047100 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR30028 - UPF0014 INNER MEMBRANE PROTEIN YBBM-RELATED Genomic Order:  471
Name:  ? Glyma.10G047100 Secondary Identifier:  ? PAC:30477887
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G047100 0.5kb upstream 0.5kb upstream 2756 true Chr10: 4219384-4222139 Glycine max
Glyma.10G047100 0.5kb upstream 0.5kb upstream 500 false Chr10: 4221640-4222139 Glycine max
Glyma.10G047100 0.5kb downstream 0.5kb downstream 2756 true Chr10: 4218884-4221639 Glycine max
Glyma.10G047100 0.5kb downstream 0.5kb downstream 500 false Chr10: 4218884-4219383 Glycine max
Glyma.10G047100 1.0kb upstream 1.0kb upstream 3256 true Chr10: 4219384-4222639 Glycine max
Glyma.10G047100 1.0kb upstream 1.0kb upstream 1000 false Chr10: 4221640-4222639 Glycine max
Glyma.10G047100 1.0kb downstream 1.0kb downstream 3256 true Chr10: 4218384-4221639 Glycine max
Glyma.10G047100 1.0kb downstream 1.0kb downstream 1000 false Chr10: 4218384-4219383 Glycine max
Glyma.10G047100 2.0kb upstream 2.0kb upstream 4256 true Chr10: 4219384-4223639 Glycine max
Glyma.10G047100 2.0kb upstream 2.0kb upstream 2000 false Chr10: 4221640-4223639 Glycine max
Glyma.10G047100 2.0kb downstream 2.0kb downstream 4256 true Chr10: 4217384-4221639 Glycine max
Glyma.10G047100 2.0kb downstream 2.0kb downstream 2000 false Chr10: 4217384-4219383 Glycine max
Glyma.10G047100 5.0kb upstream 5.0kb upstream 7256 true Chr10: 4219384-4226639 Glycine max
Glyma.10G047100 5.0kb upstream 5.0kb upstream 5000 false Chr10: 4221640-4226639 Glycine max
Glyma.10G047100 5.0kb downstream 5.0kb downstream 7256 true Chr10: 4214384-4221639 Glycine max
Glyma.10G047100 5.0kb downstream 5.0kb downstream 5000 false Chr10: 4214384-4219383 Glycine max
Glyma.10G047100 10.0kb upstream 10.0kb upstream 12256 true Chr10: 4219384-4231639 Glycine max
Glyma.10G047100 10.0kb upstream 10.0kb upstream 10000 false Chr10: 4221640-4231639 Glycine max
Glyma.10G047100 10.0kb downstream 10.0kb downstream 12256 true Chr10: 4209384-4221639 Glycine max
Glyma.10G047100 10.0kb downstream 10.0kb downstream 10000 false Chr10: 4209384-4219383 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309876 5265 Fabidae View MSA
124064060 5270 Rosid View MSA
123739826 5271 Pentapetalae View MSA
122792432 5272 Eudicot View MSA
122042449 5273 Angiosperm View MSA
121345105 5274 Embryophyte View MSA
123424866 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.744014 0.0 2.75921    
cufflinks 1.34624 0.0 4.82425    
cufflinks 0.374883 0.0 1.43482   Low
cufflinks 1.35845 0.0 4.86239    
cufflinks 2.30426 0.0 7.8685    
cufflinks 0.838079 0.0 3.08884    
cufflinks 14.8817 0.0 40.5066   High
cufflinks 2.09025 0.0 7.21298    
cufflinks 7.95409 0.0 23.0128   High
cufflinks 0.308        
cufflinks 7.556     High High
cufflinks 0.572        
cufflinks 0.755        
cufflinks 0.043     Low Low
cufflinks 7.172     High High
cufflinks 3.387        
cufflinks 0.571        
cufflinks 0.419        
cufflinks 0.768        
cufflinks 2.172        
cufflinks 4.715        
cufflinks 3.437        
cufflinks 3.977        
cufflinks 5.307        
cufflinks 7.515     High High
cufflinks 0.099       Low

0 Strain