Gene : Glyma.10G048300 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10848:SF0 - MEIOTIC RECOMBINATION PROTEIN SPO11 Genomic Order:  483
Name:  ? Glyma.10G048300 Secondary Identifier:  ? PAC:30474926
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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G048300 0.5kb upstream 0.5kb upstream 3261 true Chr10: 4337364-4340624 Glycine max
Glyma.10G048300 0.5kb upstream 0.5kb upstream 500 false Chr10: 4337364-4337863 Glycine max
Glyma.10G048300 0.5kb downstream 0.5kb downstream 3261 true Chr10: 4337864-4341124 Glycine max
Glyma.10G048300 0.5kb downstream 0.5kb downstream 500 false Chr10: 4340625-4341124 Glycine max
Glyma.10G048300 1.0kb upstream 1.0kb upstream 3761 true Chr10: 4336864-4340624 Glycine max
Glyma.10G048300 1.0kb upstream 1.0kb upstream 1000 false Chr10: 4336864-4337863 Glycine max
Glyma.10G048300 1.0kb downstream 1.0kb downstream 3761 true Chr10: 4337864-4341624 Glycine max
Glyma.10G048300 1.0kb downstream 1.0kb downstream 1000 false Chr10: 4340625-4341624 Glycine max
Glyma.10G048300 2.0kb upstream 2.0kb upstream 4761 true Chr10: 4335864-4340624 Glycine max
Glyma.10G048300 2.0kb upstream 2.0kb upstream 2000 false Chr10: 4335864-4337863 Glycine max
Glyma.10G048300 2.0kb downstream 2.0kb downstream 4761 true Chr10: 4337864-4342624 Glycine max
Glyma.10G048300 2.0kb downstream 2.0kb downstream 2000 false Chr10: 4340625-4342624 Glycine max
Glyma.10G048300 5.0kb upstream 5.0kb upstream 7761 true Chr10: 4332864-4340624 Glycine max
Glyma.10G048300 5.0kb upstream 5.0kb upstream 5000 false Chr10: 4332864-4337863 Glycine max
Glyma.10G048300 5.0kb downstream 5.0kb downstream 7761 true Chr10: 4337864-4345624 Glycine max
Glyma.10G048300 5.0kb downstream 5.0kb downstream 5000 false Chr10: 4340625-4345624 Glycine max
Glyma.10G048300 10.0kb upstream 10.0kb upstream 12761 true Chr10: 4327864-4340624 Glycine max
Glyma.10G048300 10.0kb upstream 10.0kb upstream 10000 false Chr10: 4327864-4337863 Glycine max
Glyma.10G048300 10.0kb downstream 10.0kb downstream 12761 true Chr10: 4337864-4350624 Glycine max
Glyma.10G048300 10.0kb downstream 10.0kb downstream 10000 false Chr10: 4340625-4350624 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303659 5265 Fabidae View MSA
124068832 5270 Rosid View MSA
123738269 5271 Pentapetalae View MSA
122790268 5272 Eudicot View MSA
122045880 5273 Angiosperm View MSA
121348033 5274 Embryophyte View MSA
123427912 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.08919 0.0 22.4314    
cufflinks 9.84643 0.0 26.925    
cufflinks 8.40979 0.0 23.2916    
cufflinks 8.3284 0.0 23.0618    
cufflinks 12.4135 0.0 33.4217   High
cufflinks 4.54221 0.0 13.4419   Low
cufflinks 7.21821 0.0 20.2026    
cufflinks 10.0927 0.0 27.5165    
cufflinks 7.26335 0.0 20.3315    
cufflinks 4.738        
cufflinks 6.424     High  
cufflinks 3.9        
cufflinks 6.49        
cufflinks 8.592     High High
cufflinks 2.677        
cufflinks 2.665        
cufflinks 7.509     High  
cufflinks 2.51        
cufflinks 7.555     High  
cufflinks 1.582       Low
cufflinks 6.796     High  
cufflinks 2.063       Low
cufflinks 3.888        
cufflinks 8.016     High High
cufflinks 1.897       Low
cufflinks 8.298     High High

0 Strain