Gene : Glyma.10G049500 G. max Wm82.a2.v1
Defline:  (1 of 24) PF07333 - S locus-related glycoprotein 1 binding pollen coat protein (SLR1-BP) Genomic Order:  495
Name:  ? Glyma.10G049500 Secondary Identifier:  ? PAC:30474740
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G049500 0.5kb upstream 0.5kb upstream 955 true Chr10: 4450969-4451923 Glycine max
Glyma.10G049500 0.5kb upstream 0.5kb upstream 500 false Chr10: 4450969-4451468 Glycine max
Glyma.10G049500 0.5kb downstream 0.5kb downstream 955 true Chr10: 4451469-4452423 Glycine max
Glyma.10G049500 0.5kb downstream 0.5kb downstream 500 false Chr10: 4451924-4452423 Glycine max
Glyma.10G049500 1.0kb upstream 1.0kb upstream 1455 true Chr10: 4450469-4451923 Glycine max
Glyma.10G049500 1.0kb upstream 1.0kb upstream 1000 false Chr10: 4450469-4451468 Glycine max
Glyma.10G049500 1.0kb downstream 1.0kb downstream 1455 true Chr10: 4451469-4452923 Glycine max
Glyma.10G049500 1.0kb downstream 1.0kb downstream 1000 false Chr10: 4451924-4452923 Glycine max
Glyma.10G049500 2.0kb upstream 2.0kb upstream 2455 true Chr10: 4449469-4451923 Glycine max
Glyma.10G049500 2.0kb upstream 2.0kb upstream 2000 false Chr10: 4449469-4451468 Glycine max
Glyma.10G049500 2.0kb downstream 2.0kb downstream 2455 true Chr10: 4451469-4453923 Glycine max
Glyma.10G049500 2.0kb downstream 2.0kb downstream 2000 false Chr10: 4451924-4453923 Glycine max
Glyma.10G049500 5.0kb upstream 5.0kb upstream 5455 true Chr10: 4446469-4451923 Glycine max
Glyma.10G049500 5.0kb upstream 5.0kb upstream 5000 false Chr10: 4446469-4451468 Glycine max
Glyma.10G049500 5.0kb downstream 5.0kb downstream 5455 true Chr10: 4451469-4456923 Glycine max
Glyma.10G049500 5.0kb downstream 5.0kb downstream 5000 false Chr10: 4451924-4456923 Glycine max
Glyma.10G049500 10.0kb upstream 10.0kb upstream 10455 true Chr10: 4441469-4451923 Glycine max
Glyma.10G049500 10.0kb upstream 10.0kb upstream 10000 false Chr10: 4441469-4451468 Glycine max
Glyma.10G049500 10.0kb downstream 10.0kb downstream 10455 true Chr10: 4451469-4461923 Glycine max
Glyma.10G049500 10.0kb downstream 10.0kb downstream 10000 false Chr10: 4451924-4461923 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121611536 5273 Angiosperm Singleton cluster - no MSA
122244710 5265 Fabidae Singleton cluster - no MSA
123988974 5270 Rosid Singleton cluster - no MSA
123564116 5271 Pentapetalae Singleton cluster - no MSA
122598886 5272 Eudicot Singleton cluster - no MSA
120883767 5274 Embryophyte Singleton cluster - no MSA
122924582 5275 Viridiplantae Singleton cluster - no MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.92315 0.0 3.67315    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain