Gene : Glyma.10G040100 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR22884//PTHR22884:SF366 - SET DOMAIN PROTEINS Genomic Order:  401
Name:  ? Glyma.10G040100 Secondary Identifier:  ? PAC:30478303
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G040100 0.5kb upstream 0.5kb upstream 7847 true Chr10: 3534381-3542227 Glycine max
Glyma.10G040100 0.5kb upstream 0.5kb upstream 500 false Chr10: 3541728-3542227 Glycine max
Glyma.10G040100 0.5kb downstream 0.5kb downstream 7847 true Chr10: 3533881-3541727 Glycine max
Glyma.10G040100 0.5kb downstream 0.5kb downstream 500 false Chr10: 3533881-3534380 Glycine max
Glyma.10G040100 1.0kb upstream 1.0kb upstream 8347 true Chr10: 3534381-3542727 Glycine max
Glyma.10G040100 1.0kb upstream 1.0kb upstream 1000 false Chr10: 3541728-3542727 Glycine max
Glyma.10G040100 1.0kb downstream 1.0kb downstream 8347 true Chr10: 3533381-3541727 Glycine max
Glyma.10G040100 1.0kb downstream 1.0kb downstream 1000 false Chr10: 3533381-3534380 Glycine max
Glyma.10G040100 2.0kb upstream 2.0kb upstream 9347 true Chr10: 3534381-3543727 Glycine max
Glyma.10G040100 2.0kb upstream 2.0kb upstream 2000 false Chr10: 3541728-3543727 Glycine max
Glyma.10G040100 2.0kb downstream 2.0kb downstream 9347 true Chr10: 3532381-3541727 Glycine max
Glyma.10G040100 2.0kb downstream 2.0kb downstream 2000 false Chr10: 3532381-3534380 Glycine max
Glyma.10G040100 5.0kb upstream 5.0kb upstream 12347 true Chr10: 3534381-3546727 Glycine max
Glyma.10G040100 5.0kb upstream 5.0kb upstream 5000 false Chr10: 3541728-3546727 Glycine max
Glyma.10G040100 5.0kb downstream 5.0kb downstream 12347 true Chr10: 3529381-3541727 Glycine max
Glyma.10G040100 5.0kb downstream 5.0kb downstream 5000 false Chr10: 3529381-3534380 Glycine max
Glyma.10G040100 10.0kb upstream 10.0kb upstream 17347 true Chr10: 3534381-3551727 Glycine max
Glyma.10G040100 10.0kb upstream 10.0kb upstream 10000 false Chr10: 3541728-3551727 Glycine max
Glyma.10G040100 10.0kb downstream 10.0kb downstream 17347 true Chr10: 3524381-3541727 Glycine max
Glyma.10G040100 10.0kb downstream 10.0kb downstream 10000 false Chr10: 3524381-3534380 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313267 5265 Fabidae View MSA
124073861 5270 Rosid View MSA
123746063 5271 Pentapetalae View MSA
122795414 5272 Eudicot View MSA
122049912 5273 Angiosperm View MSA
123428946 5275 Viridiplantae View MSA
121350319 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.098263 0.0 0.480568 Low Low
cufflinks 1.52053 0.0 6.39459   High
cufflinks 0.22282 0.0 1.08601    
cufflinks 0.701105 0.0 3.69393    
cufflinks 0.754249 0.0 3.95457    
cufflinks 0.147868 0.0 0.717439 Low Low
cufflinks 2.11518 0.0 8.1136   High
cufflinks 0.395568 0.0 2.37406    
cufflinks 0.280246 0.0 1.74683    
cufflinks 0.108        
cufflinks 0.008     Low Low
cufflinks 0.197        
cufflinks 0.138        
cufflinks 0.204        
cufflinks 0.01     Low Low
cufflinks 0.101     Low  
cufflinks 0.026     Low  
cufflinks 0.238       High
cufflinks 0.48       High
cufflinks 0.067     Low  
cufflinks 0.007     Low Low
cufflinks 0.101        
cufflinks 0.111        
cufflinks 0.006     Low Low
cufflinks 0.09     Low  
cufflinks 0.021     Low  

0 Strain