Gene : Glyma.10G040800 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR23139//PTHR23139:SF66 - RNA-BINDING PROTEIN Genomic Order:  408
Name:  ? Glyma.10G040800 Secondary Identifier:  ? PAC:30474370
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G040800 0.5kb upstream 0.5kb upstream 4016 true Chr10: 3585296-3589311 Glycine max
Glyma.10G040800 0.5kb upstream 0.5kb upstream 500 false Chr10: 3585296-3585795 Glycine max
Glyma.10G040800 0.5kb downstream 0.5kb downstream 4016 true Chr10: 3585796-3589811 Glycine max
Glyma.10G040800 0.5kb downstream 0.5kb downstream 500 false Chr10: 3589312-3589811 Glycine max
Glyma.10G040800 1.0kb upstream 1.0kb upstream 4516 true Chr10: 3584796-3589311 Glycine max
Glyma.10G040800 1.0kb upstream 1.0kb upstream 1000 false Chr10: 3584796-3585795 Glycine max
Glyma.10G040800 1.0kb downstream 1.0kb downstream 4516 true Chr10: 3585796-3590311 Glycine max
Glyma.10G040800 1.0kb downstream 1.0kb downstream 1000 false Chr10: 3589312-3590311 Glycine max
Glyma.10G040800 2.0kb upstream 2.0kb upstream 5516 true Chr10: 3583796-3589311 Glycine max
Glyma.10G040800 2.0kb upstream 2.0kb upstream 2000 false Chr10: 3583796-3585795 Glycine max
Glyma.10G040800 2.0kb downstream 2.0kb downstream 5516 true Chr10: 3585796-3591311 Glycine max
Glyma.10G040800 2.0kb downstream 2.0kb downstream 2000 false Chr10: 3589312-3591311 Glycine max
Glyma.10G040800 5.0kb upstream 5.0kb upstream 8516 true Chr10: 3580796-3589311 Glycine max
Glyma.10G040800 5.0kb upstream 5.0kb upstream 5000 false Chr10: 3580796-3585795 Glycine max
Glyma.10G040800 5.0kb downstream 5.0kb downstream 8516 true Chr10: 3585796-3594311 Glycine max
Glyma.10G040800 5.0kb downstream 5.0kb downstream 5000 false Chr10: 3589312-3594311 Glycine max
Glyma.10G040800 10.0kb upstream 10.0kb upstream 13516 true Chr10: 3575796-3589311 Glycine max
Glyma.10G040800 10.0kb upstream 10.0kb upstream 10000 false Chr10: 3575796-3585795 Glycine max
Glyma.10G040800 10.0kb downstream 10.0kb downstream 13516 true Chr10: 3585796-3599311 Glycine max
Glyma.10G040800 10.0kb downstream 10.0kb downstream 10000 false Chr10: 3589312-3599311 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304981 5265 Fabidae View MSA
124068050 5270 Rosid View MSA
123743802 5271 Pentapetalae View MSA
122790530 5272 Eudicot View MSA
122047712 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121310781 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.4219 0.0 41.3321    
cufflinks 16.9296 0.0 45.2778   High
cufflinks 10.3963 0.0 28.4259   Low
cufflinks 13.4295 0.0 36.1635    
cufflinks 13.1502 0.0 35.4119    
cufflinks 11.3162 0.0 30.7382   Low
cufflinks 17.9192 0.0 47.8476   High
cufflinks 12.9747 0.0 34.9488    
cufflinks 12.3418 0.0 33.3543    
cufflinks 3.99        
cufflinks 2.361       Low
cufflinks 3.524        
cufflinks 4.329        
cufflinks 5.212        
cufflinks 3.812        
cufflinks 6.635       High
cufflinks 2.06       Low
cufflinks 4.612        
cufflinks 6.812       High
cufflinks 6.842       High
cufflinks 3.237        
cufflinks 6.718       High
cufflinks 6.696       High
cufflinks 2.414       Low
cufflinks 6.225        
cufflinks 3.455        

0 Strain